DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and LOC102549842

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:XP_006227879.1 Gene:LOC102549842 / 102549842 RGDID:7600894 Length:889 Species:Rattus norvegicus


Alignment Length:353 Identity:122/353 - (34%)
Similarity:176/353 - (49%) Gaps:41/353 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 EHQLAQSGDQQEEHITMESVHEFQPAEVEYVTIKNEFETIVTEEDEFEVMNDSGAHDAILDCQMI 246
            |||...|   ||....:|...|...|.:|.    ::.:|..|||..:.......|..|   |.::
  Rat   211 EHQKIHS---QENLFKIEVCSEIFCAPIEL----SKDQTFCTEEKPYRYEEYVKAFSA---CSLL 265

  Fly   247 -----VIPAEGAID-EVIGEETLELEGDGREEHLLPEAEDVCEDEDFLEESLDSAPPTAGEALPY 305
                 :.|.|.|.. |..|.....|       |.:.:....||.:.                  |
  Rat   266 SEHPRIHPGEKAFKCEECGNAFCTL-------HSVSKVNIHCEVKS------------------Y 305

  Fly   306 VCTVCQKAFRQQCRLNQHMRSHVDEKQYECEECGKRLKHLRNYKEHMLTHTNVKPHQCSICGRFY 370
            .|..|.|||.....|.||...|..||.|:||||||......|.|:|.:||:..||::|.:||:.:
  Rat   306 KCEECGKAFASHLSLIQHKIGHTREKPYQCEECGKMFYCSSNLKQHQITHSQEKPYKCEVCGKVF 370

  Fly   371 RTTSSLAVHKRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQH 435
            ||...|:.|.|.|:.:|||.|::||:.:....:|.:|||.||||:||.|:.|.|.:|..|.|::|
  Rat   371 RTCWQLSKHLRIHSGEKPYKCEECGKAFYTLSYLTQHKLGHTGEKPYKCEECGKTFYYPSVLKEH 435

  Fly   436 KISHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEKP 500
            ...|:|:|.:.|:.||.....:||..:|..:|:|.|.:||:.||.||:..|.|:.|..:|:|.||
  Rat   436 LAIHSGEKPYRCDECGKEFCTRSGRSRHQRIHTGEKPYKCEQCGKAFSTHSYLSHHKIVHTGHKP 500

  Fly   501 FKCEVCVKAFPTKKRLASHMRVHNKESP 528
            :|||.|.|.|....||..|.|:|::|:|
  Rat   501 YKCEECGKKFYYPSRLKEHQRIHSQENP 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 62/153 (41%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
COG5048 <387..523 CDD:227381 58/135 (43%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
zf-H2C2_2 403..426 CDD:290200 13/22 (59%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
zf-H2C2_2 487..510 CDD:290200 11/22 (50%)
C2H2 Zn finger 503..523 CDD:275368 9/19 (47%)
LOC102549842XP_006227879.1 KRAB 5..63 CDD:214630
KRAB 5..44 CDD:279668
C2H2 Zn finger 84..104 CDD:275368
C2H2 Zn finger 112..132 CDD:275368
C2H2 Zn finger 140..160 CDD:275368
C2H2 Zn finger 168..188 CDD:275368
C2H2 Zn finger 196..216 CDD:275368 3/4 (75%)
C2H2 Zn finger 252..272 CDD:275368 3/22 (14%)
C2H2 Zn finger 280..299 CDD:275368 4/25 (16%)
COG5048 303..736 CDD:227381 96/244 (39%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
zf-H2C2_2 347..372 CDD:290200 10/24 (42%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
zf-H2C2_2 376..400 CDD:290200 10/23 (43%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
zf-H2C2_2 462..484 CDD:290200 10/21 (48%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 9/19 (47%)
C2H2 Zn finger 531..551 CDD:275368
C2H2 Zn finger 559..579 CDD:275368
C2H2 Zn finger 587..607 CDD:275368
zf-H2C2_2 602..624 CDD:290200
C2H2 Zn finger 615..635 CDD:275368
C2H2 Zn finger 643..663 CDD:275368
C2H2 Zn finger 671..691 CDD:275368
C2H2 Zn finger 699..719 CDD:275368
C2H2 Zn finger 727..747 CDD:275368
C2H2 Zn finger 755..775 CDD:275368
C2H2 Zn finger 783..803 CDD:275368
zf-H2C2_2 798..820 CDD:290200
C2H2 Zn finger 811..831 CDD:275368
C2H2 Zn finger 839..859 CDD:275368
C2H2 Zn finger 867..887 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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