DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dwg and LOC100537361

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:XP_003198540.5 Gene:LOC100537361 / 100537361 -ID:- Length:911 Species:Danio rerio


Alignment Length:239 Identity:105/239 - (43%)
Similarity:139/239 - (58%) Gaps:0/239 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 PYVCTVCQKAFRQQCRLNQHMRSHVDEKQYECEECGKRLKHLRNYKEHMLTHTNVKPHQCSICGR 368
            |..||:|.|:|||...|::|||:|..||.:.|.:|||......|:..||..||..||..|:.||:
Zfish   342 PITCTLCGKSFRQSSSLSKHMRTHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPFTCTQCGK 406

  Fly   369 FYRTTSSLAVHKRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLR 433
            .:|..|||..|.|||..:||:.|.|||:.:....||.:|...||||:|..|..|.|::..||||.
Zfish   407 SFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSHLNQHIRIHTGEKPITCTQCGKSFRQSSSLY 471

  Fly   434 QHKISHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGE 498
            :|...|||:|.|||..||...||.|.:..||.:|:|.|...|..||.:|..:|:|..|:|:|:||
Zfish   472 KHMRIHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPITCTQCGKSFHQSSSLYKHMRIHTGE 536

  Fly   499 KPFKCEVCVKAFPTKKRLASHMRVHNKESPVTATVAVQSINPPS 542
            |||.|..|.|:|.....|..|||:|..|.|:|.|...:|....|
Zfish   537 KPFTCTQCGKSFRQASSLNKHMRIHTGEKPITCTQCGKSFRQSS 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 66/146 (45%)
C2H2 Zn finger 307..327 CDD:275368 11/19 (58%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 9/19 (47%)
COG5048 <387..523 CDD:227381 61/135 (45%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
zf-H2C2_2 403..426 CDD:290200 11/22 (50%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
zf-H2C2_2 487..510 CDD:290200 12/22 (55%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
LOC100537361XP_003198540.5 C2H2 Zn finger 37..53 CDD:275368
C2H2 Zn finger 61..81 CDD:275368
zf-H2C2_2 73..96 CDD:316026
C2H2 Zn finger 89..109 CDD:275368
C2H2 Zn finger 117..137 CDD:275368
COG5048 141..557 CDD:227381 95/214 (44%)
C2H2 Zn finger 145..165 CDD:275368
C2H2 Zn finger 173..193 CDD:275368
C2H2 Zn finger 205..225 CDD:275368
C2H2 Zn finger 233..253 CDD:275368
C2H2 Zn finger 261..281 CDD:275368
C2H2 Zn finger 289..309 CDD:275368
C2H2 Zn finger 317..337 CDD:275368
C2H2 Zn finger 345..365 CDD:275368 11/19 (58%)
C2H2 Zn finger 373..393 CDD:275368 7/19 (37%)
C2H2 Zn finger 401..421 CDD:275368 9/19 (47%)
COG5048 425..865 CDD:227381 68/156 (44%)
C2H2 Zn finger 429..449 CDD:275368 7/19 (37%)
C2H2 Zn finger 457..477 CDD:275368 8/19 (42%)
C2H2 Zn finger 485..505 CDD:275368 8/19 (42%)
C2H2 Zn finger 513..533 CDD:275368 8/19 (42%)
C2H2 Zn finger 541..561 CDD:275368 8/19 (42%)
C2H2 Zn finger 569..589 CDD:275368 3/12 (25%)
C2H2 Zn finger 597..617 CDD:275368
C2H2 Zn finger 625..645 CDD:275368
C2H2 Zn finger 653..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
C2H2 Zn finger 709..729 CDD:275368
C2H2 Zn finger 737..757 CDD:275368
C2H2 Zn finger 765..785 CDD:275368
C2H2 Zn finger 793..813 CDD:275368
C2H2 Zn finger 821..841 CDD:275368
C2H2 Zn finger 849..869 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.