DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and znf282

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:XP_004916953.2 Gene:znf282 / 100495066 XenbaseID:XB-GENE-6467990 Length:541 Species:Xenopus tropicalis


Alignment Length:542 Identity:124/542 - (22%)
Similarity:199/542 - (36%) Gaps:143/542 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IAEVVVLNCRTCTRACKLHKPLQEEID---LGSEGSTTLAS------MLNYCTGLSFEPQDGA-- 59
            :||..|.:|||..      ..:||.:.   |.|.|...|.|      |...|..|:..|.:..  
 Frog    63 LAETWVHHCRTDV------GNVQEFVRDTLLKSPGHFVLCSEHFEEDMFELCGDLTLLPSETKYK 121

  Fly    60 -------AMP---------------QHICLH-----CLQLLEQAFNFKRMVIDSDELLRLGL-DE 96
                   |:|               .|:.:|     ...||||.   |:..:::|::..... .|
 Frog   122 RTKLKVNAIPTVFPTGAPKMRKQAEHHLKIHERKQLLDNLLEQQ---KKPQLEADQITSPSTSQE 183

  Fly    97 ARCSSFHESQ----THSPNQSQ-----------QHDQQ---------QQAFDSTEEYVMIEMLNE 137
            :..:||.|.:    .:.|.:.|           |:.::         |:...:|...:.:...:|
 Frog   184 SEYNSFQEKEEDCRLYHPRKPQLLRRKLLPLKSQYLKKCFTPVPRALQRKTPTTFNRIAVYFSDE 248

  Fly   138 EQENVANLDEELAEEDRRIFAMTVDEEEEFLTEEVDQDDELSEEEHQLAQSGDQQEEHITMESVH 202
            |.       |.|.|..|.::...:.|..|.||..     :.|...:.|....|:..:|.|..|  
 Frog   249 EW-------EMLEEWQRDLYKNMIKENSEALTSL-----DYSVSPNILLNIKDEDVKHYTSNS-- 299

  Fly   203 EFQPAEVEYVTIKNEFETIVTEEDEFEVMNDSGAHDAILDCQMIVIP-AEGAIDEVIGE------ 260
              .|.:||      :.::..||:..|  ||    ||.....:...:| .:|:.|...||      
 Frog   300 --SPDDVE------QAKSPKTEDHTF--MN----HDVFSRIKQDRVPYLDGSPDSEEGELNGYLS 350

  Fly   261 -------ETLELEGDGREEHLLPEAEDV--CEDEDFLEESLDSAPPTAGEALPYVCTVCQKAFRQ 316
                   .::|.:..|.....|...|.|  |.......:...::........|      ...||.
 Frog   351 SYNVPISTSIEEDNFGMWSGALSVQEPVSQCYSSSITNDIYSASKWKTINVSP------SSFFRP 409

  Fly   317 QCRLNQHMRSHVDEKQYECEECGKRLKHLRNYKEHMLTHTNVKPHQCSICGRFYRTTSSLAVHKR 381
                       :..||........||.          ...:::|::||.|.:.:...|:|..|.|
 Frog   410 -----------IAPKQDFTSPNSPRLG----------GPMDLRPYKCSACDKSFTVKSNLIKHHR 453

  Fly   382 THAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKISHTGKKAFT 446
            .|..::||.|..|.:.::...||..|:.||||||||.|:.|||::..:|.|.||:..|||::.|.
 Frog   454 IHTGERPYKCTHCSKSFSRNSHLITHQRTHTGERPYKCNECDKSFIQNSVLIQHQRIHTGERPFR 518

  Fly   447 CEICGVGLSQKSGYKKHMMVHS 468
            |:.|....||||...:|...|:
 Frog   519 CDECNKSFSQKSCLIRHQRTHT 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871 24/114 (21%)
COG5048 <297..451 CDD:227381 44/153 (29%)
C2H2 Zn finger 307..327 CDD:275368 2/19 (11%)
C2H2 Zn finger 335..355 CDD:275368 2/19 (11%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
COG5048 <387..523 CDD:227381 35/82 (43%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
zf-H2C2_2 403..426 CDD:290200 15/22 (68%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368
zf-H2C2_2 487..510 CDD:290200
C2H2 Zn finger 503..523 CDD:275368
znf282XP_004916953.2 THAP 35..135 CDD:214951 19/77 (25%)
KRAB_A-box 237..275 CDD:143639 11/44 (25%)
SFP1 <428..507 CDD:227516 30/78 (38%)
C2H2 Zn finger 435..455 CDD:275368 7/19 (37%)
C2H2 Zn finger 463..483 CDD:275368 5/19 (26%)
SUF4-like 487..>535 CDD:411020 21/47 (45%)
C2H2 Zn finger 491..512 CDD:411020 8/20 (40%)
C2H2 Zn finger 491..511 CDD:275368 8/19 (42%)
C2H2 Zn finger 519..539 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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