DRSC/TRiP Functional Genomics Resources

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Protein Alignment dwg and znf853

DIOPT Version :9

Sequence 1:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster
Sequence 2:XP_031748869.1 Gene:znf853 / 100487314 XenbaseID:XB-GENE-6031115 Length:604 Species:Xenopus tropicalis


Alignment Length:547 Identity:148/547 - (27%)
Similarity:233/547 - (42%) Gaps:115/547 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LHCLQLLEQAFNFKRMVIDSDELLRLGLDEA--RCS------SFHESQTHSPNQS------QQHD 117
            ||....:.|..|.|:::.....:::|...|.  ||.      |..|.:....||:      ::.:
 Frog    80 LHAPGSVIQKENDKKILELISNIIQLLTGEVAIRCEDVSIYFSLEEWEYIKGNQALLRKIMKEEE 144

  Fly   118 QQQQAFDSTEEYVMIEMLNEEQENVANLDEELA--EEDRRIFAMTVDEEEEFLTEEVDQDDELSE 180
            :.||......||      .:::|..|:|...|.  .|..:|.|    |..:|..:...::.|:|.
 Frog   145 EPQQVCPPDGEY------EDKREIPADLGGTLCYNNEPSKIGA----EGADFCVDGELRNPEISP 199

  Fly   181 EEHQLAQSGDQQE-------EHITMESVHEFQPAEVEYVTIKN----EFETIVTEEDEFEVMNDS 234
            .|.....:|.::|       ..:|.:......|..:...::.|    ::.::|.:|:|   .:..
 Frog   200 AEQPPPANGIKEEAASDCSINPLTEQIQGTDTPTPIMGCSLNNNSAEDYRSVVIKEEE---SSSE 261

  Fly   235 GAHDAILDCQMIVIPAEGAIDEVIGEETLELEGDGREEHLLPEAEDVCEDE-DFLEESLDSAPPT 298
            |.:.:  ||.:        ..::.|.:|   .....|.:...|....|:.: .||:..     .|
 Frog   262 GENQS--DCSI--------NSQIQGTDT---PTPNTETYNCSECHKRCKTKAGFLKHQ-----KT 308

  Fly   299 AGEALPYVCTVCQKAFRQQCRLNQHMRSHVDEKQYECEECGKRLKHLRNYKEHMLTHTNVKPHQC 363
            .....|:||:||:|.|:.|.:||.|.|||..||.:.|.|||||.....:..||..|||..||:.|
 Frog   309 HTGVKPFVCSVCEKPFKYQSKLNLHKRSHTGEKPFSCSECGKRFTRHVHLIEHHRTHTGEKPYSC 373

  Fly   364 SICGR-------FYR-------------------------------------------------T 372
            |.||:       |||                                                 :
 Frog   374 SDCGKHFSHSSDFYRHCRIHRLEKLCICSQCNKQFTSHSELIVHQSSHVGRGQYPCSECGKHFVS 438

  Fly   373 TSSLAVHKRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKI 437
            ||.|.:|.|.|:.::||:|.:||:.:....:|..||..||||:|:.|..|.|.:.|.:.|..||.
 Frog   439 TSQLKIHLRVHSVERPYSCSECGKCFKYSSYLTVHKRIHTGEKPFTCTECGKGFIDRAYLNSHKK 503

  Fly   438 SHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEKPFK 502
            .|||||.|||..||...|:.|..|.|..:|:|.|...|..||..|..:::|..|.|:|:|||||.
 Frog   504 IHTGKKPFTCTECGKCFSEGSRLKFHTRIHTGEKPFSCSECGKCFRNSTSLKFHTRIHTGEKPFA 568

  Fly   503 CEVCVKAFPTKKRLASHMRVHNKESPV 529
            |..|.|.|..:.:|.:|.::|....|:
 Frog   569 CNECGKYFMYRYQLTAHSQLHTGGEPL 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dwgNP_477338.3 zf-AD 14..91 CDD:214871 5/23 (22%)
COG5048 <297..451 CDD:227381 71/209 (34%)
C2H2 Zn finger 307..327 CDD:275368 10/19 (53%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 12/75 (16%)
COG5048 <387..523 CDD:227381 56/135 (41%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
zf-H2C2_2 403..426 CDD:290200 11/22 (50%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
zf-H2C2_2 487..510 CDD:290200 12/22 (55%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
znf853XP_031748869.1 KRAB_A-box 112..145 CDD:413388 6/32 (19%)
COG5048 <265..502 CDD:227381 70/254 (28%)
C2H2 Zn finger 289..309 CDD:275368 4/24 (17%)
C2H2 Zn finger 317..337 CDD:275368 10/19 (53%)
C2H2 Zn finger 345..365 CDD:275368 8/19 (42%)
C2H2 Zn finger 373..393 CDD:275368 7/19 (37%)
C2H2 Zn finger 401..421 CDD:275368 0/19 (0%)
C2H2 Zn finger 429..449 CDD:275368 5/19 (26%)
C2H2 Zn finger 457..477 CDD:275368 6/19 (32%)
C2H2 Zn finger 485..505 CDD:275368 7/19 (37%)
zf-H2C2_2 497..521 CDD:404364 13/23 (57%)
C2H2 Zn finger 513..533 CDD:275368 7/19 (37%)
zf-H2C2_2 525..550 CDD:404364 9/24 (38%)
C2H2 Zn finger 541..561 CDD:275368 7/19 (37%)
zf-H2C2_2 553..576 CDD:404364 12/22 (55%)
C2H2 Zn finger 569..589 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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