DRSC/TRiP Functional Genomics Resources

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Protein Alignment vilya and zhp-3

DIOPT Version :10

Sequence 1:NP_570026.1 Gene:vilya / 31264 FlyBaseID:FBgn0283545 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_001250802.1 Gene:zhp-3 / 172644 WormBaseID:WBGene00006976 Length:389 Species:Caenorhabditis elegans


Alignment Length:253 Identity:58/253 - (22%)
Similarity:101/253 - (39%) Gaps:67/253 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WIHCNSCCALFCDK-KHTFFLLACHHVFCERCVKVSAGRTPSDAPIFECSTCRRSVRGRQLTNSM 81
            ::|||.|   |..| ...||:.:|.|:||.:|.|         |.:..|..|:::||..:|..::
 Worm     3 FVHCNKC---FNRKPPDGFFISSCFHIFCTKCAK---------ADLAVCLICKKNVRLVRLDGNI 55

  Fly    82 PNHFKQLFHPEPFTIGNDFVE------TFQRGNHRHFDKY--KER-KELEMDKLFKDIEVAKSVC 137
            .:..| ::..:|..:..|.:.      .||:....|..||  ||: |:.:|:..|:         
 Worm    56 SSGIK-IYFADPIKMVADSLAKIQKKIDFQQSTRDHLVKYLTKEKEKKRQMEVYFR--------- 110

  Fly   138 QKRFLEAQMLRVERKKLMQRSRYIKAEVANRKAEMHRMAQAYRS--------RSLTSQSSS---- 190
                .:.|....:||||.:.:.:|:......:|......:|.|.        :|:|:..|:    
 Worm   111 ----TKGQEFDSQRKKLAEATAWIQMAEKKLQASEEERVKAEREIEECQAKLKSMTNLMSADTLG 171

  Fly   191 ---------SAQRSARGRPRGRGTATQSSSRRRSTESAKRQQITSFIHPPN----NSF 235
                     |...|....|    :..:||:  .||.:.....::|....||    |||
 Worm   172 MNSQTPFPFSLAESQETAP----SLVESSA--NSTFNMVSPLVSSPASSPNSINYNSF 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vilyaNP_570026.1 zf-RING_5 20..70 CDD:434085 17/50 (34%)
zhp-3NP_001250802.1 RING-HC_RNF212B 4..43 CDD:438405 16/50 (32%)
EnvC 64..>187 CDD:443969 26/135 (19%)

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