DRSC/TRiP Functional Genomics Resources

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Protein Alignment vilya and rnf212b

DIOPT Version :10

Sequence 1:NP_570026.1 Gene:vilya / 31264 FlyBaseID:FBgn0283545 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_031746975.1 Gene:rnf212b / 116406647 -ID:- Length:299 Species:Xenopus tropicalis


Alignment Length:261 Identity:56/261 - (21%)
Similarity:101/261 - (38%) Gaps:95/261 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WIHCNSCCALFCDKKHTFFLLACHHVFCERCVKVSAGRTPSDAPIFECSTCRRSVRGRQLTNSMP 82
            |.|||.|   |.||..||::..|.|:.|::||...           :||.|:|:.:..|::::|.
 Frog     3 WFHCNMC---FLDKNETFYITNCGHIHCQKCVTQD-----------KCSVCKRACKYLQISDNMK 53

  Fly    83 -------NHFKQLFHPEPFTIGNDFVETFQRGNHRHFDKYK-----ERKELEMDKLFKDIEVAKS 135
                   .|.||:                   ..::||:..     ::::||:...|....:.|:
 Frog    54 PQEKIFFRHHKQI-------------------AQKYFDQITQVSSFQKQQLELQMAFYKHYLCKT 99

  Fly   136 VCQKRFLEAQMLRV-----ERKKLMQRSRYIKAEVANRKAEMHRMAQAYR------------SRS 183
               :|.|:..:.:|     |.|.:.:.:..::..|:..|..:.|.....|            |::
 Frog   100 ---QRALQDALQKVNSQESELKTVKKDNAELRTLVSALKGSLTRSQNNNRLYIPRPVAITSPSQT 161

  Fly   184 LTSQS-------SSSAQRSARGRPRGRG-----------------------TATQSSSRRRSTES 218
            :|.|.       ||||:...||..|..|                       .:|:|||.|.|:::
 Frog   162 VTPQQSNHDTSRSSSAESLLRGLSRSGGQSQPLSAGRVQERTTPISSYESPMSTRSSSNRMSSQT 226

  Fly   219 A 219
            :
 Frog   227 S 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vilyaNP_570026.1 zf-RING_5 20..70 CDD:434085 17/49 (35%)
rnf212bXP_031746975.1 RING-HC_RNF212B 4..40 CDD:438405 16/49 (33%)

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