DRSC/TRiP Functional Genomics Resources

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Protein Alignment vilya and rnf212

DIOPT Version :10

Sequence 1:NP_570026.1 Gene:vilya / 31264 FlyBaseID:FBgn0283545 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_001410208.2 Gene:rnf212 / 100534793 ZFINID:ZDB-GENE-110208-6 Length:285 Species:Danio rerio


Alignment Length:249 Identity:54/249 - (21%)
Similarity:82/249 - (32%) Gaps:73/249 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WIHCNSCCALFCDK--KHTFFLLACHHVFCERCVKVSAGRTPSDAPIFECSTCRRSVRGRQLTN- 79
            ||.||:|   |...  :....:.:|.|:.|..|.:......        |..|:...:...|:: 
Zfish     4 WICCNAC---FTSSGPERQMAVTSCGHIICNVCFQRGKQNL--------CLICKAKCQISPLSDK 57

  Fly    80 SMPNHFKQLFHPEPFTIGNDFVETFQ--------RGNH--RHFDKYKERKELEMDKLFKDIEVAK 134
            |..:.|..        |.:..|:.|.        :|.|  |....|::           .||..|
Zfish    58 SCSDVFSD--------ISSVAVKYFSEISKVLQFQGKHQKRLLAYYQQ-----------TIERMK 103

  Fly   135 SVCQKRFLEAQMLRVERKKLMQRSRYI-KAEVANRKAEMHRMAQAYR------------------ 180
            ....|...|.||:   .||:.:::.|| |.|...:........|:.|                  
Zfish   104 EEGLKMQQEMQMM---SKKIAEQNAYISKLETTVQNQSSRLALQSNRDLPSASLPASSVTKIPFC 165

  Fly   181 -----SRSLTSQSSSSAQRSARGRPRGRGTATQSSSRRRSTESAKRQQITSFIH 229
                 ||||   |::|...|.....|||...|.:.||.....|.:..:|.|..|
Zfish   166 SPLSLSRSL---SNASLAESTEMDSRGRSHKTDALSRICLRSSPQNCRIGSVPH 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vilyaNP_570026.1 zf-RING_5 20..70 CDD:434085 10/51 (20%)
rnf212NP_001410208.2 None

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