DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)Yb and TDRD12

DIOPT Version :10

Sequence 1:NP_477494.2 Gene:fs(1)Yb / 31262 FlyBaseID:FBgn0000928 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_001424876.1 Gene:TDRD12 / 91646 HGNCID:25044 Length:1335 Species:Homo sapiens


Alignment Length:900 Identity:183/900 - (20%)
Similarity:339/900 - (37%) Gaps:226/900 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 PPTSSED--YKAEADVLLSAATPATIPNDNKEQEIN-LSVEDATVKLLASF----ELGSTDSAAV 249
            |..:::|  .|...|.|..:      |.|..|::.: :|::|...::.:|.    :.|.|..|..
Human   283 PTATAQDKAVKCNMDSLRDS------PKDKSEKKHHCISLKDTNKRVESSVYWPAKRGITIYADP 341

  Fly   250 D--ESSPAAAKFNAPVYSPFVTENPTKSLD-AEFQELVKSFKVQNVFKNMNLPPPPSVSIEEPVS 311
            |  |:|..:.|.|         |.|.:..: .|:.|.....|:.. |.|           .:|:.
Human   342 DVPEASALSQKSN---------EKPLRLTEKKEYDEKNSCVKLLQ-FLN-----------PDPLR 385

  Fly   312 SASASDYRHQIDTTSLDSIRTVKDSPASLAVVPFSAGGITYNNYGVLGWSRHAVVPCYGLTEAPD 376
            :...||         |..::.:|.....:.|:                  |:.:.||..:..:| 
Human   386 ADGISD---------LQQLQKLKGLQPPVVVL------------------RNKIKPCLTIDSSP- 422

  Fly   377 ISTIIRRAMQQ---MGVARSRARAVQRFAWPHVSLGKSVLVVGNLQIGKTWSYLP--TVCQRS-- 434
            :|..:::|:|:   .|.:.:     :.::||.::.|..|:|:.:.:.......||  ||.|..  
Human   423 LSADLKKALQRNKFPGPSHT-----ESYSWPPIARGCDVVVISHCESNPLLYLLPVLTVLQTGAC 482

  Fly   435 HEDLQRRPDVGRGPTCIFVCPN----------QGQGKQIERWMSTLLCLLGSASGFEDVVTHWDK 489
            ::.|..|    .||..:.|||.          .|:.....|.:..:|..:|         .|.::
Human   483 YKSLPSR----NGPLAVIVCPGWKKAQFIFELLGEYSMSSRPLHPVLLTIG---------LHKEE 534

  Fly   490 TQLVDIVRRLKKPVG--ILLTSVDLLLQLLNHNPVGSIFDAQAVKCIALDNL-NDMVRVLPNDTM 551
                  .:..|.|.|  :::|:...||:||         ..|::..:.|.:| .|.|.||     
Human   535 ------AKNTKLPRGCDVIVTTPYSLLRLL---------ACQSLLFLRLCHLILDEVEVL----- 579

  Fly   552 KLLQRLPEMFQLTQN-------------KCQLLVSGRIWHTDLMVQHIL-PLMPDVLVLFDDALE 602
             .|:...:||.:..|             ..|::..|..|:..  ::|:: ..|.|..::.....|
Human   580 -FLEANEQMFAILDNFKKNIEVEERESAPHQIVAVGVHWNKH--IEHLIKEFMNDPYIVITAMEE 641

  Fly   603 ASVYGGVQLDVRVVADEPEKIEHLKALIAERRNFANEPAVMVCS-NSTEVLLLRRSLQAIGVNAH 666
            |::||.||..|.:.. |.||...|...:....:.|.:..:..|| ..||::     .:.:..::.
Human   642 AALYGNVQQVVHLCL-ECEKTSSLLQALDFIPSQAQKTLIFTCSVAETEIV-----CKVVESSSI 700

  Fly   667 ICV---SEACYS--NVAE-WLRQSPSG---LLLVTDDVVPRLKCGKIPLLIHYSFASMWARFKNR 722
            .|:   .|..::  ||.| |.::..||   :|.:|||.||.|.......:||:||.:....|..|
Human   701 FCLKMHKEMIFNLQNVLEQWKKKLSSGSQIILALTDDCVPLLAITDATCVIHFSFPASPKVFGGR 765

  Fly   723 F----SLFYANLKSPTTR--PVGQSVVFAKPTDLENIWKLCDFYMKHKLPRPGHL----LGILSQ 777
            .    ..|:|...||..:  ...:||:.....|..:...:..:..:.....|..|    .|:|..
Human   766 LYCMSDHFHAEQGSPAEQGDKKAKSVLLLTEKDASHAVGVLRYLERADAKVPAELYEFTAGVLEA 830

  Fly   778 RRLEEQPTSRSLCHQMAAFGDCLRHKCMYRHVMWRDEVLPPDHY---PKNGLIRFLVLVCYSPAA 839
            :  |::...|.||..:.|||.|       .|.::||:.:.||.:   |:..|.|           
Human   831 K--EDKKAGRPLCPYLKAFGFC-------NHFIFRDKRICPDRHRINPETDLPR----------- 875

  Fly   840 LAVRLSDQ-FPT--AIRFLNFPMSD----LGERVQRHYELEA--NRHMHPNPVPGEMAVVKNINR 895
               :||.| .|:  .|:.:.|.:.:    .|..|.:|.:|.|  |..|:..........|:.:.:
Human   876 ---KLSSQALPSFGYIKIIPFYILNATNYFGRIVDKHMDLYATLNAEMNEYFKDSNKTTVEKVEK 937

  Fly   896 -----------YERVHIVSVESNV------MVLVQLLDTSTECFSYKTSQLYSCDKIFKDSPREA 943
                       :.||.::.|....      .:||:.:|........: .||....:.|...|.:|
Human   938 FGLYGLAEKTLFHRVQVLEVNQKEDAWALDDILVEFIDEGRTGLVTR-DQLLHLPEHFHTLPPQA 1001

  Fly   944 MDLRILGLQPESLDRIWPDDARNLVRKDFFRRTHNKRNRQFHAVVQSAIHRTIFV 998
            ::..:..::|...:..|.......:......:.|:       |.|..|:..|:::
Human  1002 VEFIVCRVKPADNEIEWNPKVTRYIHHKIVGKLHD-------AKVILALGNTVWI 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)YbNP_477494.2 Tudor_SF <862..960 CDD:470623 20/116 (17%)
TDRD12NP_001424876.1 None

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