DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)Yb and PRP5

DIOPT Version :9

Sequence 1:NP_477494.2 Gene:fs(1)Yb / 31262 FlyBaseID:FBgn0000928 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_009796.1 Gene:PRP5 / 852539 SGDID:S000000441 Length:849 Species:Saccharomyces cerevisiae


Alignment Length:642 Identity:119/642 - (18%)
Similarity:225/642 - (35%) Gaps:205/642 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 LSISARNAEMLVITPCDEENEKEGKGETEPEIVQQRMPLKVDALNSMQLYEIKENTPPTSSEDYK 200
            :.:|.|:.|.:...| :.:|||:...|....:.:::|.      ||..:|:              
Yeast   115 IGVSFRSKEHIQKAP-EHDNEKDPLDEFMTSLKEEKMS------NSKGMYD-------------- 158

  Fly   201 AEADVLLSAATPATIPNDNKEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAA-----AKFN 260
             ..|:                    |.|||..      ||||.||...|::::..:     ||..
Yeast   159 -RGDI--------------------LDVEDQL------FELGGTDDEDVEDNTDNSNIAKIAKLK 196

  Fly   261 AP------VYSPFVTENPTKSLDAEFQELVKSFKVQNVFKNMNLPPPPSVSIEEPVSSASASDYR 319
            |.      .|||           .|.:...|:|.:::                |.|||.|..:..
Yeast   197 AKKRVKQIYYSP-----------EELEPFQKNFYIES----------------ETVSSMSEMEVE 234

  Fly   320 HQIDTTSLDSIRTVKDSPASLAVVPFSAGGITYNNYGVLGWSRH--AVVPCYGLTEAPDISTIIR 382
            ..  ..|||:|: :|.:.....|..:|..|::.:...::....|  ::.|               
Yeast   235 EL--RLSLDNIK-IKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTP--------------- 281

  Fly   383 RAMQQMGVARSRARAVQRFAWPHVSLGKSVLVVGNLQIGKTWSY-LPTVCQ-RSHEDLQRRPDVG 445
                           :|..|.|.:..|:.|:.:.....|||.|| ||.:.| ::...|.:..   
Yeast   282 ---------------IQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHE--- 328

  Fly   446 RGPTCIFVCPNQGQGKQIERWMS----------TLLCLLGSASGFEDVVTHWDKTQLVDIVRRLK 500
            .||..:.:.|.:....||...::          ::.|..||..          |.|:.|    ||
Yeast   329 TGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEM----------KKQITD----LK 379

  Fly   501 KPVGILLTSVDLLLQLLNHNPVGSIFDAQAVKCIALDNLNDM--VRVLPNDTMKLLQRLPE---- 559
            :...|::.:....:.:|..|. |.:...:.:..:.:|..:.:  :...|..|..:....|:    
Yeast   380 RGTEIVVATPGRFIDILTLND-GKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCV 443

  Fly   560 MFQLT-QNKCQLLVSGRIWHTDLMVQHILPLMPDVLVLFDDALEASVYGGVQLDVRVVADEPEKI 623
            :|..| .||.:.. :.|:.|:.:.:              ....:..|...|:...|:...|.||.
Yeast   444 LFSATFPNKLRSF-AVRVLHSPISI--------------TINSKGMVNENVKQKFRICHSEDEKF 493

  Fly   624 EHLKALIAERRNFANE-----------------PAVMVCSNSTEVLLLRRSLQAIGVNAHICVSE 671
            ::|..||.||..|.:|                 .|::..|:......:.:.|...|:     |:.
Yeast   494 DNLVQLIHERSEFFDEVQSENDGQSSDVEEVDAKAIIFVSSQNICDFISKKLLNAGI-----VTC 553

  Fly   672 ACYS---------NVAEWLRQSPSGLLLVTDDVVPRLKCGKIPLLIHYSFASMWARF 719
            |.::         |:.::.|:..| :||.|:.:...|...::.|:|.|:....:|::
Yeast   554 AIHAGKPYQERLMNLEKFKREKNS-ILLCTEVLSRGLNVPEVSLVIIYNAVKTFAQY 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)YbNP_477494.2 TUDOR <859..948 CDD:278965
PRP5NP_009796.1 SrmB 227..731 CDD:223587 83/455 (18%)
DEADc_DDX46 244..468 CDD:350711 47/287 (16%)
KH-I_PRP5_like 749..837 CDD:411902
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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