DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)Yb and BoYb

DIOPT Version :9

Sequence 1:NP_477494.2 Gene:fs(1)Yb / 31262 FlyBaseID:FBgn0000928 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster


Alignment Length:758 Identity:175/758 - (23%)
Similarity:323/758 - (42%) Gaps:118/758 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 TSLDSIRTVKDSPAS------LAVVPFSAGGITYNNYGVLGWSRHAVVPCYGLTEAPDISTIIRR 383
            :|.||:..|.||.:.      |.....|...:.:.|..:....|.|.|     :..||    |..
  Fly    12 SSRDSVYEVGDSYSGQNANRPLVATNCSEYAVAHANCQLRPVRRFAEV-----SLLPD----ILE 67

  Fly   384 AMQQMGVARSRARAVQRFAWPHVS--LGKSVLVVGNLQIGKTWSYLPTVCQR----------SHE 436
            .|:.:|:  :|...:|.:.|||::  .|...::||:...|:|::|:|.||..          ..|
  Fly    68 TMRNLGL--NRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVCHAVSRALMDFTGQCE 130

  Fly   437 DLQR---RPDVGRGPTCIFVCPNQGQGKQIERWMSTLLCLLGSASGFEDVVT---HWDKTQLVDI 495
            |::.   :|| ..||..:.:.|:.   :::.:..:..|.||..|.. .|.||   :...|:....
  Fly   131 DVEHDISQPD-RYGPIALILVPDL---RRVHQVSAMCLALLRKAHK-NDSVTLALNVSSTKSSQF 190

  Fly   496 VRRLKKPVGILLTSVDLLLQLLNHNPVGSIFDAQAVKCIALDNLNDMVRVLPNDTMKLLQRLPEM 560
            ..:|...||.|:.:...|:......|  .:.....::.:..|:::.|.|....|..::||   |:
  Fly   191 FLKLLNGVGCLVATPAQLVWFWQEAP--GLMRFPCLQFLVYDDVDLMSREQLQDVQQVLQ---EI 250

  Fly   561 FQLTQNKCQLLVSGRIWHTDLMVQHILPLMPDVLVLFDDALEASVYGGVQLDVRVVADEPEKIEH 625
            ..|:.:...::||....||  ::..:..:.....::|.|.|||::|||.::.:.::..|.:    
  Fly   251 LPLSHSPQVVMVSKSYCHT--LMSKLRAVNDKPALVFGDILEAALYGGTRIRISIMRSEAK---- 309

  Fly   626 LKALIAERRNFANEP--AVMVCSNSTEVLLLRRSLQAIGVNAHICVSEACYSNVAE--------- 679
            ..|::...:..:.|.  .|:.||:..::..|   :.|:.|..:.|:.   |...|:         
  Fly   310 ANAVVQMLQQCSPEEFRTVIFCSDDGDMQCL---VAALEVQHYSCLP---YYQTADLEVRQQVHS 368

  Fly   680 WLRQSPSGLLLVTDDVVPRLKCGKIPLLIHYSFASMWARFKNR---FSLFYANLKSPTTRPVGQ- 740
            |..:| :|::|:..|..|.|.......:||:|.:..|::||.|   .|....|:..||...|.: 
  Fly   369 WQARS-NGVILLCTDNCPELDIRDAHTIIHHSMSHSWSKFKLRHLKISDNLCNMVKPTASIVKKP 432

  Fly   741 --SVVFAKPTDLENIWKLCDFYMKHKLPRPGHLLGILSQRRLEEQPTSRS----LCHQMAAFGDC 799
              |:|.....:...:.:|.||...|:  :..|.|..:::|..:|...:|:    ||.|:...|.|
  Fly   433 LYSLVLLDDNNHRQLPRLVDFLQLHQ--KVDHRLVEVAKRIRQELGKARNDQHQLCDQILVLGKC 495

  Fly   800 LRHKCMYRHVMWRDEVLPPDHYPKNGLIRFLVLVCYSPAALAVRLSDQFPTAIRFLNFPMSDLGE 864
            ....|..||.:...: ..||:.|.:|.::..::..|||....|||.:..|....:.....|.:.|
  Fly   496 YDPVCESRHRLSHID-RRPDYLPASGDVKVQLVKVYSPTHFCVRLLEHLPPKGTWRMMEYSAVQE 559

  Fly   865 RVQRHYELEANRHMHPNPVPGEMAVVKNINRYERVHIVS---------VESNVMVLVQLLDTSTE 920
            ...:..:::..|...| ||.|.:.:.......|||.::.         |:|::.|.:|.||..|.
  Fly   560 FRMQLTQIKEPRRYWP-PVAGAICMYHTTFTKERVRVLKVAAIKNTNIVQSDLTVKLQALDVDTR 623

  Fly   921 CFSYKTSQLYSCDKIFKDSPREAMDLRILGLQPESLDRIWPDD-ARNL------VRKDFFRRTHN 978
            .||....:|:.|.:..:.....|.|||:.|..|...:|.|.:: .||:      :.||.|     
  Fly   624 IFSTNCGKLFECPEALQQEAPLACDLRLPGWVPYFGERSWTEENIRNVNLILTQLPKDHF----- 683

  Fly   979 KRNRQFHAVVQSAIHRTIFVRNIYDDEGNDLLSFV-INRFRSH 1020
                 ..|.:......|:||:        ||::.: .::|::|
  Fly   684 -----LQAKILFVAAGTLFVQ--------DLVAIMYADQFKAH 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)YbNP_477494.2 TUDOR <859..948 CDD:278965 24/97 (25%)
BoYbNP_649430.1 P-loop_NTPase 81..263 CDD:304359 42/191 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470066
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0334
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0016799
OrthoInspector 1 1.000 - - otm26337
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22655
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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