DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)Yb and SoYb

DIOPT Version :9

Sequence 1:NP_477494.2 Gene:fs(1)Yb / 31262 FlyBaseID:FBgn0000928 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_001245959.1 Gene:SoYb / 34331 FlyBaseID:FBgn0051755 Length:1476 Species:Drosophila melanogaster


Alignment Length:1188 Identity:271/1188 - (22%)
Similarity:446/1188 - (37%) Gaps:328/1188 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YASPKSGAASLDFLAHTLRKREANTEKTILICQQNFE-----------AERLKFELAE-RDVNTI 75
            ::.||        |...:.:|..|.|..:.|....|.           .:.|...|.: ::....
  Fly    72 WSPPK--------LVRGVVRRRQNEEYLVWILDYGFNLCCSVWDLWPLPDHLSRSLCDFKEGGVA 128

  Fly    76 LLPPHGAMVGQVLLLWSKGYINQALILCDGMLEHLGVVEAN----LVIHTTLPELN----KF--- 129
            |:.||...|      ||:..|..    .|..||     :||    .|:|......|    ||   
  Fly   129 LIAPHSGSV------WSRSAIES----LDKQLE-----DANQLTFQVVHRGKSNRNFGLLKFRSS 178

  Fly   130 ---EERLKWL-------------------SISARNAE--------------MLVITPCDEENEKE 158
               |:...:|                   .||...||              :|.:.....||.||
  Fly   179 CQTEDAANFLIKQDQGRCKETLTMAIPYEDISFEKAEINDMAIDTRPRLRRILELVVLLSENAKE 243

  Fly   159 GKGETEPEIVQQRMPLKVDAL----------NSMQLYEIKENTPPTSSEDYKAEADVLLSAATP- 212
              ....|..:||:   |:|||          ||::|....::...:|.:...|.....:|...| 
  Fly   244 --STPTPSAIQQK---KLDALLQSHETYLIPNSVKLLSKVQSISESSMQTALANRSKQISKELPH 303

  Fly   213 -ATIPNDNKEQEI------NLSVEDATVKLLASFELGSTDSAAVDESSP-----AAAKFNAPV-- 263
             |....||:::|:      |||...:.|| |:|::..:|||:.:  |.|     ::...|:.|  
  Fly   304 KANQSEDNRKKEVKYLESENLSECLSKVK-LSSYQQKNTDSSTL--SGPRNLASSSTNSNSNVRK 365

  Fly   264 ---------------YSPFVTENPTK---------SLDAEFQELVKSFKVQNVFKNMNLPPPPSV 304
                           .|..:|||.|.         |:|          |::.:|.:|....|...
  Fly   366 SMTLFKSSGAHLTTSLSVPLTENCTNQSNNRTVVFSMD----------KMEQIFNDMLGKNPSER 420

  Fly   305 SIEE---PVSSASASDYRHQIDTTSLDSIRTVKDSPASLAVVPFSAGGITYNNYGVLGWSRHAVV 366
            |:::   .:.:::.|..:..::...:.....:.|...|:.:           .:.||..|...|.
  Fly   421 SVQKNRSQMPNSNVSTTKRCVEKMHVCRSENMGDRKPSVCL-----------KHLVLAHSPEPVN 474

  Fly   367 PCYGLTEAPDISTIIRRAMQQMGVARSRARAVQRFAWPHVSLGKSVLVVGNLQIGKTWSYLPTVC 431
            |.....|.|..:||: .||..:..  ......|.:||||:....|:::|.....|::|||||.:|
  Fly   475 PVTSYKELPLGNTIL-NAMDDLNF--QTPLPTQIYAWPHLVNRGSLVLVNPSGTGRSWSYLPVIC 536

  Fly   432 Q---RSHEDLQRRPD--VGRGPTCIFVCPNQGQGKQIERWMSTLLCLLGSASGFEDVVTHWDKTQ 491
            .   .|.|::....|  :..||..|.:..:....|::......|:... :....:.|.||  ...
  Fly   537 SSVLSSFENVTSNLDTRIAPGPLAILIVDSVENAKKLASHCEFLMKDF-NTQNLKVVNTH--AHS 598

  Fly   492 LVDIVRRLKKPVGILLTSVDLLLQLLNH-----NPVG---SIFDAQAVKCIALDNLNDMVRVLPN 548
            ::|:...|....|:|:|::..|..:|::     ||..   .|||....|  .|||          
  Fly   599 MMDVYMMLLNSCGVLVTTLAHLNNILSNELPLVNPTRLEFIIFDDYDRK--RLDN---------- 651

  Fly   549 DTMKLLQRLPEMFQLTQN----KCQLLVSGRIWHTDLMVQHILPLMPDVLVLFDDALEASVYGGV 609
                 .:.|.|:||...:    ..||::..:.||:: ..|.:|......|:||.|.|||::|||:
  Fly   652 -----AELLKEVFQKVNSIGGLSKQLVLVAQQWHSE-RFQKLLNRTTKPLILFGDFLEAALYGGL 710

  Fly   610 QLDVRVVADEPEKIEHLKALIAERRNFANEPAVMVCSNSTEVLLLRRSLQAIGVNAHI-CVSEAC 673
            :.:| .:.....|...|..::|| ::.:.:..::.|.|..|:    ..|.||.:.|.: ||    
  Fly   711 KFNV-TLRSSALKARQLLDILAE-QDGSKKRTLIYCKNQMEL----EELSAILIEAGLQCV---- 765

  Fly   674 YSNVAEWLRQSPSGLLLVTDDVV-PRLKCGKIPLLIHYSFASMWARFKNRFSLFYANLKSPTTRP 737
              ::::...|||:.|:||.|..| .:|....|.||||:|....|.||..||.....|:::..|:|
  Fly   766 --DISKAQNQSPNRLMLVDDSQVRKQLPVRNIQLLIHFSLPESWLRFSRRFHTMADNIRNLFTKP 828

  Fly   738 V--GQSVVFAKPTDLENI--W-KLCDFYMKHKLPRPGHLLGILSQRRLE-EQPTSRSL--CHQMA 794
            :  ||.::.....|..|.  | ::..|...|         |:.:|...: ||....:|  |....
  Fly   829 IGRGQDLITYILMDENNAKEWPRIMKFLQDH---------GLTTQSMPDSEQQLDNTLPYCPYKL 884

  Fly   795 AFGDCLRHKCMYRHVMWRDEVLPPDHYPKNG--------LIRFLVLVCYSPAALAVR-------- 843
            :.|:|.|::|..||...:.::      ||.|        |||...|..|.||.:||.        
  Fly   885 SNGNCNRNQCNKRHHFLKTDL------PKIGNPLLQPGTLIRCKFLKAYDPAHMAVMPMKYKSKD 943

  Fly   844 ----LSDQFPTAIRFLNFPMSDLGERVQRHYELEANRHMHPNPVP-GEMAVVKNINRYERVHIVS 903
                :...:|:....|.|.||           ....|.:| ||.. .::..|::.....||.||.
  Fly   944 STIWIDVPYPSYPSTLVFKMS-----------FGVPRKVH-NPCKINDVCFVQHKELLSRVRIVD 996

  Fly   904 VESNVMVLVQLLDTSTECFSYKTSQLYSCDKIFKDSPREAMDLRILGLQPESLDRIWPDDARNLV 968
            ..:...|.|||:|..||....|.|||..|.:.|:|..:.|||:|:.||.......:|..|:    
  Fly   997 NPARPQVTVQLMDYGTELLQVKASQLLECPEQFRDLQQLAMDIRLSGLAGSGQGGMWSTDS---- 1057

  Fly   969 RKDFFRRTHNKRNRQFHAVVQSAIHRTIFVRNIYDDEGNDLLSFVINRFRSHQDECCQLKLDAMV 1033
                                                     :.:|.:||....:|..|:.:|..|
  Fly  1058 -----------------------------------------IQWVQDRFADINEEIMQITVDFGV 1081

  Fly  1034 MS---------SKDCPYM 1042
            :.         .::||.|
  Fly  1082 LDVAYVKEIALIEECPTM 1099

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)YbNP_477494.2 TUDOR <859..948 CDD:278965 28/89 (31%)
SoYbNP_001245959.1 TUDOR 7..115 CDD:278965 8/50 (16%)
SrmB 475..877 CDD:223587 116/446 (26%)
P-loop_NTPase 480..>646 CDD:304359 43/171 (25%)
TUDOR 927..1043 CDD:278965 37/127 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470065
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0334
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0016799
OrthoInspector 1 1.000 - - otm26337
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22655
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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