DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)Yb and Ddx46

DIOPT Version :9

Sequence 1:NP_477494.2 Gene:fs(1)Yb / 31262 FlyBaseID:FBgn0000928 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_001268984.1 Gene:Ddx46 / 212880 MGIID:1920895 Length:1032 Species:Mus musculus


Alignment Length:948 Identity:170/948 - (17%)
Similarity:321/948 - (33%) Gaps:312/948 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NFEAERLKFELAERDVNTILLPPHGAMVGQVLLLWSKGYINQALILCDGMLEHLGVVEANLVIHT 121
            ||:..:|:.|:.:|.              :.:..|.:....:|       :|::|.::       
Mouse   150 NFDQNKLEEEMRKRK--------------ERVEKWREEQRKKA-------MENIGELK------- 186

  Fly   122 TLPELNKFEERLKWLSISARNAEMLVITPCDEENEKEGKGETEPEIVQQRMPLKVDALNSMQLY- 185
              .|:.:.::..|| |:.            |::::::...|.|.|..:    ::.:.|:.:..| 
Mouse   187 --KEIEEMKQGKKW-SLE------------DDDDDEDDPAEAEKEGTE----MEDEELDPLDAYM 232

  Fly   186 -EIKENTPPTSSEDYKAEAD------------VLLSAATPATIPNDNKEQEINLSVEDATVKLLA 237
             |:||.....:....|..|.            |.:.....|.:..|.|:.|:..:.:||   :..
Mouse   233 EEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDA---MEY 294

  Fly   238 SFELGSTD-SAAVDESSPAAAKFNAPV------YSPFVTENPTKSLDAEFQELVK-SFKVQNVFK 294
            |.|....| ..|:........|...||      |.||     .|:...|..||.| |.:..|||:
Mouse   295 SSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPF-----RKNFYVEVPELAKMSQEEVNVFR 354

  Fly   295 NMNLPPPPSVSIEEPVSSASASDYRHQIDTTSLDSIRTVKDSPASLAVVPFSAGGITYNNYG--- 356
                     :.:|                                         |||....|   
Mouse   355 ---------LEME-----------------------------------------GITVKGKGCPK 369

  Fly   357 -VLGWSRHAVVPCYGLTEAPDISTIIRRAMQQMGVARSRARAVQRFAWPHVSLGKSVLVVGNLQI 420
             :..|     |.|       .||..|..::::.|.  .:...:|..|.|.:..|:.::.:.....
Mouse   370 PIKSW-----VQC-------GISMKILNSLKKHGY--EKPTPIQTQAIPAIMSGRDLIGIAKTGS 420

  Fly   421 GKTWSYLPTVCQRSHEDLQRRPDVGRGPTCIFVCPNQGQGKQI----ERWMSTL----LCLLGSA 477
            |||.::|..:.:  |...||..:.|.||..:.:.|.:....||    :::..||    :|:.|. 
Mouse   421 GKTIAFLLPMFR--HIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGG- 482

  Fly   478 SGFEDVVTHWDKTQLVDIVRRLKKPVGILLTSVDLLLQLLNHNPVGSIFDAQAVKCIALDNLNDM 542
                        |.:.:.:..||:...|::.:...::.:|..|. |.:.:.:.|..:.||..:.|
Mouse   483 ------------TGISEQIAELKRGAEIIVCTPGRMIDMLAANS-GRVTNLRRVTYVVLDEADRM 534

  Fly   543 ---------VRVLPNDTMKLLQRLPEMFQLTQNKCQLLVSGRIWHTDLMVQHILPLMPDVLVLFD 598
                     :|::.|...   .|...||..|..:....::.||....:.||              
Mouse   535 FDMGFEPQVMRIVDNVRP---DRQTVMFSATFPRAMEALARRILSKPIEVQ-------------- 582

  Fly   599 DALEASVYGG---VQLDVR---VVADEPEKIEHLKALIAERRNFANEPAVMVCSNSTEVL--LLR 655
                   .||   |..||.   :|.:|.:|...|..|:.   ::....:|::..:..|..  ||:
Mouse   583 -------VGGRSVVCSDVEQQVIVIEEEKKFLKLLELLG---HYQESGSVIIFVDKQEHADGLLK 637

  Fly   656 RSLQAIGVNAHICVSEACYSNVAEWLRQS-----PSGL--LLVTDDVVPR-LKCGKIPLLIHYSF 712
            ..::|    ::.|:|  .:..:.::.|.|     .:|.  |||...|..| |....:.|:::||.
Mouse   638 DLMRA----SYPCMS--LHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSC 696

  Fly   713 ASMWARFKNRF---------SLFYANLKSPTTRPVGQSVV------FAKPTDLENIWKLCDFYMK 762
            .:.:..:.:|.         ...|..:.....|..|..:.      .|.|.|||.:|.  ||  |
Mouse   697 PNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWS--DF--K 757

  Fly   763 HKLPRPGHLL---GILSQRRLEEQPTSRSLCHQMAAFGDCLRHKCMYRHVMWRDEVLPPDHYPKN 824
            .:....|.::   ...|.:..:...|.::|.::        |.|                     
Mouse   758 DQQKAEGKIIKKSSGFSGKGFKFDETEQALANE--------RKK--------------------- 793

  Fly   825 GLIRFLVLVCYSPAALAVRLSDQFPTAIRFLNFPMSDLGERVQRHYELEANRHMHPNPVPGEMAV 889
                      ...|||.::.||....|:        |:.|:::..:  .:.:.:.....||..:|
Mouse   794 ----------LQKAALGLQDSDDEDAAV--------DIDEQIESMF--NSKKRVKDMAAPGTSSV 838

  Fly   890 -VKNINRYERVHI-------------VSVESNVMVLVQ 913
             .......|::.|             :.:||.|.|:.|
Mouse   839 PAPTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQ 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)YbNP_477494.2 TUDOR <859..948 CDD:278965 12/69 (17%)
Ddx46NP_001268984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..227 18/123 (15%)
SrmB 344..826 CDD:223587 115/647 (18%)
Q motif 372..400 7/41 (17%)
DEADc 378..581 CDD:238167 44/223 (20%)
DEAD box 529..532 1/2 (50%)
Helicase_C 618..714 CDD:278689 20/101 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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