DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)Yb and C46F11.4

DIOPT Version :9

Sequence 1:NP_477494.2 Gene:fs(1)Yb / 31262 FlyBaseID:FBgn0000928 Length:1042 Species:Drosophila melanogaster
Sequence 2:NP_497743.1 Gene:C46F11.4 / 175469 WormBaseID:WBGene00008119 Length:811 Species:Caenorhabditis elegans


Alignment Length:588 Identity:111/588 - (18%)
Similarity:172/588 - (29%) Gaps:246/588 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 NTPPTSSEDYKAEADVLLSAATPATIPNDN------KEQEINLSVEDATVKLLAS---------- 238
            |.||.::         |.....|...||.|      ||||:....|.|.:....|          
 Worm    33 NVPPPAA---------LTVGNAPVPPPNRNILLSNRKEQEMKKEQEYANLMAYGSTSEKQSRRKR 88

  Fly   239 ------FELGSTDSAAVDESSPAAA----------KFNAPVYSPFV------------------T 269
                  .|.||.|......||..||          .|.|.:.....                  |
 Worm    89 IYDDEYLEGGSDDEKPASSSSKLAADDDDEEDELDAFMAGIEKQASSDKKVSEQKEKDRKEGKDT 153

  Fly   270 ENPTKS----LDAEFQELVKS-FKVQNVFKNMNLPPPPSVSIEEPVSSASASDYRHQIDTTSLDS 329
            |:|:|.    .|.:.:::.:| ||....:|.                       :|:.|...|: 
 Worm   154 EDPSKKGLGRADIDEEDMQESLFKFMEEYKE-----------------------KHENDDEQLE- 194

  Fly   330 IRTVKDSPASLAVVPFSAGGITYNNYGVLGWSRHAVVPCYGLTEAPDI--STI------------ 380
                                  |:..|.:.||...|:     ...|||  |.|            
 Worm   195 ----------------------YDEDGNIIWSWKKVI-----DPLPDIDHSQIQYQKFNKNFYEE 232

  Fly   381 ---IRRAMQQMGVAR---------------------------------------SRARAVQRFAW 403
               |:| :..|.|.|                                       .:...:|..|.
 Worm   233 HEDIKR-LHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAI 296

  Fly   404 PHVSLGKSVLVVGNLQIGKTWSYL-PTVCQRSHEDLQRRPDV--GRGPTCIFVCPNQGQGKQI-- 463
            |....|:.||.:.....|||.:|| |.:..     :..:||:  |.||..:.|.|.:....|:  
 Worm   297 PSALSGRDVLGIAKTGSGKTAAYLWPAIVH-----IMDQPDLKAGEGPVAVIVVPTRELAIQVFQ 356

  Fly   464 ------ERWMSTLLCLLGSAS-----------GFEDVVTHWDKTQLVDIVR----RLKKPVGILL 507
                  :.:....:|..|..|           |.|.||.  ...:::|:|:    ...:...::.
 Worm   357 EAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVC--TPGRIIDLVKMGATNFLRTTFLVF 419

  Fly   508 TSVDLLLQLLNHNPVGSIFD---------------AQAVKCIALDNLNDMVR------------- 544
            ...|.:..:.....|.||.|               .|.|:.:|.|.|.|.||             
 Worm   420 DEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADI 484

  Fly   545 -----VLPNDTMK---LLQRLPEMFQLTQNKCQLLVSGRIWHTDLMVQHILPLMP-DVLVLFDDA 600
                 |:.|..:|   |::.|.|...|  .|..:.|:.::...|  |...|.:.. |:::|..|.
 Worm   485 EQKVFVMQNQDVKLHWLIRNLVEFASL--GKVLIFVTKKLDSED--VAKKLKMKDFDIVLLHGDM 545

  Fly   601 LEA 603
            |:|
 Worm   546 LQA 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)YbNP_477494.2 TUDOR <859..948 CDD:278965
C46F11.4NP_497743.1 PRK04837 267..667 CDD:235314 59/293 (20%)
DEADc 267..472 CDD:238167 41/211 (19%)
HELICc 483..613 CDD:238034 17/70 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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