DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2681 and sina

DIOPT Version :10

Sequence 1:NP_570022.2 Gene:CG2681 / 31258 FlyBaseID:FBgn0024997 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_476725.1 Gene:sina / 39884 FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster


Alignment Length:281 Identity:67/281 - (23%)
Similarity:109/281 - (38%) Gaps:43/281 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LRSPLSPPPKPPMLGRTRSTGPADGKGPASNGALSPDSSIIRQSFPEGVITPSKPEKSPATPSEE 187
            :.:.::|..:.|    |.:...|...|.|:|.:.|..||....:......:.|....|.|...:.
  Fly     1 MSNKINPKRREP----TAAAAGAGATGVATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDA 61

  Fly   188 GPPTVSARHYEGLIEELRCPGCAGAMKAPILLCKSGHSVCEQCTRILLMCPLCKEPFTNSRSLTV 252
            |   :||    .|.....||.|...:..|||.|.|||.||..|...|..||.|:.|..|.|:|.:
  Fly    62 G---MSA----DLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAM 119

  Fly   253 EALCAKAHFRCGHASGGCQVRMPVVLLPWHEQQCMYKPMKC-FMGRVWGDCRWQGREVQWKEHLE 316
            |.:.:...|.|.|:..||...:.......||:.|..:|..| ..|   ..|:|||......:||.
  Fly   120 EKVASNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPG---ASCKWQGPLDLVMQHLM 181

  Fly   317 EQH--------DDRLFRSSSADL----EWNLGTRRKPLTGYYV---------FQAHDEMFNFYEI 360
            ..|        :|.:|.::..:|    :|   ...:...|::.         :..|.:.|...::
  Fly   182 MSHKSITTLQGEDIVFLATDINLPGAVDW---VMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQL 243

  Fly   361 ----HDRQRVLFTMTCTSNRR 377
                .:.:..::.:....|||
  Fly   244 IGSRKEAENFVYRLELNGNRR 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2681NP_570022.2 RING_Ubox 206..250 CDD:473075 20/43 (47%)
Sina 248..442 CDD:460824 31/156 (20%)
sinaNP_476725.1 RING_Ubox 68..118 CDD:473075 20/49 (41%)
Sina 114..310 CDD:460824 31/157 (20%)

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