DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2681 and siah-1

DIOPT Version :9

Sequence 1:NP_570022.2 Gene:CG2681 / 31258 FlyBaseID:FBgn0024997 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_500409.1 Gene:siah-1 / 177138 WormBaseID:WBGene00021369 Length:419 Species:Caenorhabditis elegans


Alignment Length:499 Identity:103/499 - (20%)
Similarity:174/499 - (34%) Gaps:130/499 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GGKEEDLKILAQLKSIEQINEQRRIFLNSTINEEVPEATNGSTVREEDLEKNLKAIDEPQSTKMP 71
            ||..:|:        ||.:...:.||                   |||  .|..:...||:..:.
 Worm    10 GGDYQDV--------IESLRRTQLIF-------------------EED--DNNSSDSAPQANHLS 45

  Fly    72 PEEVAKKTPDEVPAQEQQKEPEKVEPAKPVPPNTLTLNVKYATLPSPNVVTLRSPLSPPPK---- 132
            ..:.:....:::........|       ||||.......:....|       |...|||..    
 Worm    46 RHQTSNSLVEDMVNHSNGNPP-------PVPPGITQQQCQIGLTP-------RMSASPPSAVSTI 96

  Fly   133 --PPMLGRTRSTGPADGKGPASNGALSPDSSIIRQSFPEGVITPSKPEKS--PATPSEEGPPT-- 191
              ..:||:|.:...::..|                |.|....|.::..:|  |..|...|..|  
 Worm    97 SGTAVLGKTMARVQSNPPG----------------SIPHNTTTTAQGIQSVAPHIPIGGGGATDD 145

  Fly   192 VSARHYEGLIEELRCPGCAGAMKAPILLCKSGHSVCEQCTRILLMCPLCKEPFTNSRSLTVEALC 256
            .||.    ::....||.|...|..|.:.|.|||.||..|...|..||.|:.|..:.|:|.:|.:.
 Worm   146 SSAE----ILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKIA 206

  Fly   257 AKAHFRCGHASGGCQVRMPVVLLPWHEQQCMYKPMKC-FMGRVWGDCRWQGREVQWKEHLEEQH- 319
            ....|.|..::.||.:.........||:.|.::|..| ..|   ..|:|||......|||::.| 
 Worm   207 NTVRFPCKFSTSGCPLNFHHADKTEHEELCEFRPYCCPCPG---ASCKWQGGLSDVMEHLKKIHK 268

  Fly   320 -------DDRLFRSSSADL----EWNLGTRRKPLTGYYVFQAHDEMFNFYEIHDRQ--------- 364
                   :|.:|.::..:|    :|             |.......:||..:.::|         
 Worm   269 SITTLQGEDIVFLATDINLPGAVDW-------------VMMQSCFDYNFMLVLEKQEKYDPAQPT 320

  Fly   365 RVLFTMTCTSNRRDSKYNFAYEVTVLLPDNEALSMTQKFPVHSEYDKDILMEGTCVSIPLTELNR 429
            ::.:.:......:....||.|.:        .||.::: .:..|.....:.||..|:|..::...
 Worm   321 QMFYAVVQLIGSKKEADNFVYRL--------ELSASRR-RMSWEATPRSIHEGVVVAIQQSDCLA 376

  Fly   430 F-------LDQDKVLHYRVSVLAVKSPRRAKPPRQNLPQPADLE 466
            |       ..::..|...|::..:.:|:|..|   |..:.:|||
 Worm   377 FDSNAAQLFAENGNLGINVTISRIDTPQRRHP---NELENSDLE 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2681NP_570022.2 RING 206..244 CDD:238093 16/37 (43%)
Sina 248..442 CDD:281181 41/222 (18%)
siah-1NP_500409.1 RING 155..194 CDD:238093 16/38 (42%)
Sina 197..396 CDD:281181 41/223 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3002
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1969
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45877
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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