DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2681 and siah3

DIOPT Version :10

Sequence 1:NP_570022.2 Gene:CG2681 / 31258 FlyBaseID:FBgn0024997 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_002941011.1 Gene:siah3 / 100497552 XenbaseID:XB-GENE-6035790 Length:241 Species:Xenopus tropicalis


Alignment Length:185 Identity:34/185 - (18%)
Similarity:61/185 - (32%) Gaps:59/185 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 CRWQGREVQWKEHLEEQHDDRLFRSSSADLEWNLGTRRKPLTGYYVFQAHDEMFNFYEIHDRQRV 366
            |:|:|.......||.:.|...:..          ||.       .||.|.|       :|....|
 Frog    86 CKWEGHLEVIVSHLTQSHTINILH----------GTE-------IVFLATD-------MHLPAPV 126

  Fly   367 --LFTMTCTSN------RRDSKY--------------------NFAYEVTVLLPDNEALSMTQKF 403
              :.|.:|..:      |:..||                    ||.|::.:   :.....:|.:.
 Frog   127 DWIITHSCLGHHFLLVLRKQEKYQGYPQFFATMMLIGTSAQAQNFNYKLEL---NRNRRKLTWES 188

  Fly   404 PVHSEYD--KDILMEGTCVSIPLTELNRFLDQDKVLHYRVSVLAVKSPRRAKPPR 456
            ...|.:|  ..::.:|.|:.:..:....|.|... |...:::.|.| |...:|.:
 Frog   189 TPRSVFDCVDSVITDGDCLILNASVAQLFSDNGS-LAIGIAIAASK-PCSVEPEK 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2681NP_570022.2 RING_Ubox 206..250 CDD:473075
Sina 248..442 CDD:460824 30/169 (18%)
siah3XP_002941011.1 Sina 105..229 CDD:239753 24/151 (16%)
Blue background indicates that the domain is not in the aligned region.

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