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Protein Alignment CG2680 and Hdhd2

DIOPT Version :9

Sequence 1:	NP_570021.2	Gene:	CG2680 / 31257	FlyBaseID:	FBgn0024995	Length:	305	Species:	Drosophila melanogaster
Sequence 2:	NP_001034290.1	Gene:	Hdhd2 / 76987	MGIID:	1924237	Length:	259	Species:	Mus musculus

Alignment Length:	273	Identity:	61/273 - (22%)
Similarity:	107/273 - (39%)	Gaps:	59/273 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 VISDCDGVVWLLVGWIPNTGAAVNALKAAGKQIKFVSNNSFRSEEDYMEKFRHIGAKNVQEDDIV 89
            |:.|.:|.:.:....:|....|:..|:|....::||:|.:..|::|.:|:.:.:..: :.||:|
Mouse    10 VLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKESKKDLLERLKKLEFE-ISEDEI- 72

  Fly    90 HPVKTIVRYLKKHKPGERVYSLMSLEANETLRKHNIEFESLQVKEHLTAASLVDHLAIEKPVGAV 154
                                 ..||.|...|      .|..||:..|    |||..|:.:..|..
Mouse    73 ---------------------FTSLTAARNL------IEQKQVRPML----LVDDRALPEFTGVQ 106

  Fly   155 LFDIHLDLSYVELAKAIRHLQ-ENDDCQLIAGGSDVIMPLAENLNVAGFF-----------DFLE 207
            ..|.:..:  :.||....|.| .|...:|:..|:.:|.     ::.|.::           .|:.
Mouse   107 TQDPNAVV--IGLAPEHFHYQLLNQAFRLLLDGAPLIA-----IHKARYYKRKDGLALGPGPFVT 164

  Fly   208 HVKRYTQREATFLGKPSPILGEMFGEMFEIRDC--KRCIFIGDTLVQDVQFGKACGFQSLLVLSG 270
            .::..|..:|..:|||..   ..|.|.....||  :..:.|||....||...:..|...:||.:|
Mouse   165 ALEYATDTKAMVVGKPEK---TFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTG 226

  Fly   271 --CLTKEDMLNAP 281
              ....|:.:|.|
Mouse   227 KYKAADEEKINPP 239

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.