DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2680 and Lhpp

DIOPT Version :9

Sequence 1:NP_570021.2 Gene:CG2680 / 31257 FlyBaseID:FBgn0024995 Length:305 Species:Drosophila melanogaster
Sequence 2:XP_038939164.1 Gene:Lhpp / 361663 RGDID:1359187 Length:312 Species:Rattus norvegicus


Alignment Length:330 Identity:74/330 - (22%)
Similarity:124/330 - (37%) Gaps:91/330 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VISDCDGVVW--------LLVGWIPNTGAAVNALKAAGKQIKFVSNNSFRSEEDYMEKFRHIGAK 81
            |:.|..||::        .:.|.:    .||..||.:..:::|.:|.|.:|..:.:...:.:|. 
  Rat    14 VLLDISGVLYDSGTGGGAAIAGSV----EAVARLKRSPLKVRFCTNESQKSRRELVGVLQRLGF- 73

  Fly    82 NVQEDDIVHPVKTIVRYLKKHKPGERVYSLMSLEANETLRKHNIEFESLQVKEHLTAASLVDHLA 146
            ::.|.::..|.....:.||:                ..||.|.:..|.::        |..|.:.
  Rat    74 DISEGEVTAPAPATCQILKE----------------RGLRPHLLIHEGVR--------SEFDDID 114

  Fly   147 IEKPVGAVLFDIHLDLSYVELAKAIRHLQENDDCQLIAGGSDVI--------------------- 190
            :..|...|:.|.....||..:.:|.:.|.|.::..||:.|..:|                     
  Rat   115 MSNPNCVVIADAGEGFSYQNMNRAFQVLMELENPVLISLGKGLIVARGYSRLQVEAWINGSVGQD 179

  Fly   191 -------------MPLAE----------NLNVAGFFDFLEHVKRYTQREATFLGKPSPILGEMFG 232
                         :|..|          .|:|.|:...||:.   ...||..:|||||   |.|.
  Rat   180 GEKSDCSLLAVRELPHTEPRYYKETSGLMLDVGGYMKALEYA---CGIEAEVVGKPSP---EFFR 238

  Fly   233 EMFEI--RDCKRCIFIGDTLVQDVQFGKACGFQSLLVLSGCLTKEDMLNAPVEAQPDYYADSLAD 295
            ...:.  .:..:.|.|||.:|.||...:.||.::|.|.:|.....|..:..|.|  |.|.|:||:
  Rat   239 SALQAIGVEAHQAIMIGDDIVGDVGGAQQCGMRALQVRTGKFRPGDEHHPEVRA--DGYVDNLAE 301

  Fly   296 FTQLL 300
            ...||
  Rat   302 AVDLL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2680NP_570021.2 HAD-SF-IIA 25..270 CDD:273637 63/298 (21%)
Hydrolase_6 25..126 CDD:290083 21/108 (19%)
Hydrolase_like 220..295 CDD:289983 26/76 (34%)
LhppXP_038939164.1 HAD-SF-IIA-hyp3 11..309 CDD:162372 74/330 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343739
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D982374at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.710

Return to query results.
Submit another query.