DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2680 and C13C4.4

DIOPT Version :9

Sequence 1:NP_570021.2 Gene:CG2680 / 31257 FlyBaseID:FBgn0024995 Length:305 Species:Drosophila melanogaster
Sequence 2:NP_506040.1 Gene:C13C4.4 / 179661 WormBaseID:WBGene00007548 Length:266 Species:Caenorhabditis elegans


Alignment Length:282 Identity:68/282 - (24%)
Similarity:112/282 - (39%) Gaps:59/282 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DGVVWLLVGWIPNTGAAVNALKAAGKQIKFVSNNSFRSEEDYMEKFRHIGAKNVQEDDIVHPVKT 94
            |||.      :|.:..|||.|....| :||:||....|..:...:.:.:|. ||:|:|::.|...
 Worm    26 DGVA------VPKSAEAVNFLYQHSK-VKFLSNAKGNSNRNVARRLQRLGI-NVREEDVITPAPV 82

  Fly    95 IVRYLKKHKPGERVYSLMSLEANETLRKHNIEFESLQVKEHLTAASLVDHLAIEKPVGAVLFDIH 159
            :.:|.:::|                ||.|      |.|::.:  ....|.:....|...|:.::.
 Worm    83 VAQYCRENK----------------LRPH------LFVRDDV--LEYFDGIDTSSPNCVVMGEVE 123

  Fly   160 LDLSYVELAKAIRHLQENDDCQLIAGGSDVIMPLAENLNVAGFFD-----------FLEHVKRYT 213
            ...|:..:.:|.|.|            .|:..||...:....||.           |...:|..|
 Worm   124 EGFSFDRINRAFRIL------------IDMPKPLLITMGNGKFFQRVDGPCIDVGAFAAALKFST 176

  Fly   214 QREATFLGKPSPILGEMFGEMFEIRDCKRCIFIGDTLVQDVQFGKACGFQSLLVLSGCLTKEDML 278
            ..|...:||||....|.......::. :..:.:||.|:.||...:|||.:.:.|.:| ..:.|..
 Worm   177 NCEVLNIGKPSRFYFEQGMNALGMKP-EEIVMVGDDLMSDVGGAQACGMRGVQVRTG-KWRPDFE 239

  Fly   279 NAPVEAQPDYYADSLADFTQLL 300
            ..||  .||..||.|.|..:|:
 Worm   240 KMPV--TPDLTADCLYDAVKLI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2680NP_570021.2 HAD-SF-IIA 25..270 CDD:273637 57/250 (23%)
Hydrolase_6 25..126 CDD:290083 25/95 (26%)
Hydrolase_like 220..295 CDD:289983 23/74 (31%)
C13C4.4NP_506040.1 HAD-SF-IIA-hyp3 7..262 CDD:162372 68/282 (24%)
Hydrolase_6 10..>91 CDD:290083 21/72 (29%)
Hydrolase_like 184..255 CDD:289983 23/74 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161261
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D982374at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.710

Return to query results.
Submit another query.