DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bbeta and Eif2b2

DIOPT Version :9

Sequence 1:NP_570020.1 Gene:eIF2Bbeta / 31256 FlyBaseID:FBgn0024996 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_114447.2 Gene:Eif2b2 / 84005 RGDID:620820 Length:351 Species:Rattus norvegicus


Alignment Length:348 Identity:163/348 - (46%)
Similarity:235/348 - (67%) Gaps:15/348 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EITQLIHAIKVGLVEG-----SYNITNKTLDIFKYIIMSKSWQNADALMQIVRDQCKILQAALPQ 67
            |:::.|.:....|..|     |.::..:||.:.:.:|....|.||..||.::|.:.:.:.||.|.
  Rat    10 ELSERIESFVETLKRGGGRRSSEDMARETLGLLRRLITDHHWNNAGDLMDLIRREGRRMTAAQPS 74

  Fly    68 ETVTSNIARRILKLTREEFDLLHAKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLREA 132
            ||...|:.||:||:.|||:..||.:    :|:|....|||||:|   ...:|.|:|.....|:..
  Rat    75 ETTVGNMVRRVLKIIREEYGRLHGR----SDESDQQESLHKLLT---SGGLSEDFSFHYAPLKSN 132

  Fly   133 LLDHLQEVETELETSSENICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFLTIIVAECAP 197
            :::.:.|:..|||.::|||..||.|||||:|:|:|:|.||:||.||:.|.:||:| .:|.|||||
  Rat   133 IIEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGFSRTVEAFLREAAQKRKF-HVIAAECAP 196

  Fly   198 ACRGHNLAASLANEKNVEIVVIPDAAIFAMMSRVNKVIIGTHSVLANGGLRAACGAYTVALAAKH 262
            .|:||.:|.:| :|..:|..|:.||||||:|||||||||||.::||||.|||..|.:|:||||||
  Rat   197 FCQGHEMAVNL-SEAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGSLRAVAGTHTLALAAKH 260

  Fly   263 YSVPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPY-DSIPAREAKVYSPMFDYVPPELVTLFI 326
            :|.|:||.|||:||||....|:|:|:.....|:|:|: :.....:..|:.|:||||||:|:||||
  Rat   261 HSTPLIVCAPMFKLSPQFPSEEDSFHKFVAPEEVLPFTEGDILEKVSVHCPVFDYVPPDLITLFI 325

  Fly   327 SNTGGHAPSYVYRLLTELYHPED 349
            ||.||:||||||||::|||||:|
  Rat   326 SNIGGNAPSYVYRLMSELYHPDD 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BbetaNP_570020.1 GCD2 8..345 CDD:275543 158/342 (46%)
IF-2B 21..334 CDD:279362 146/318 (46%)
Eif2b2NP_114447.2 GCD2 13..344 CDD:224105 157/339 (46%)
IF-2B 29..333 CDD:279362 145/312 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341720
Domainoid 1 1.000 278 1.000 Domainoid score I1645
eggNOG 1 0.900 - - E1_COG1184
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6507
Inparanoid 1 1.050 306 1.000 Inparanoid score I2555
OMA 1 1.010 - - QHG54382
OrthoDB 1 1.010 - - D396237at33208
OrthoFinder 1 1.000 - - FOG0005038
OrthoInspector 1 1.000 - - oto95709
orthoMCL 1 0.900 - - OOG6_102470
Panther 1 1.100 - - LDO PTHR45859
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4090
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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