DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bbeta and eif-2Bbeta

DIOPT Version :9

Sequence 1:NP_570020.1 Gene:eIF2Bbeta / 31256 FlyBaseID:FBgn0024996 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_493014.1 Gene:eif-2Bbeta / 173067 WormBaseID:WBGene00012950 Length:340 Species:Caenorhabditis elegans


Alignment Length:349 Identity:94/349 - (26%)
Similarity:166/349 - (47%) Gaps:56/349 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EGSYNITNKTLDIFKYIIMSKSWQNADALMQIVRDQCKILQAALPQETVTSNIARRILKLTREEF 86
            :.|.:|...|:::.:.||..::.:..:.|...:.:.||.|..|...|.:..||...|.||.|:| 
 Worm    25 DSSSSIAIATVNLIRKIIFRENPKTMNDLQVSLANHCKKLHGAERSELIIINIGLMITKLARDE- 88

  Fly    87 DLLHAK--------VQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETE 143
             :|..|        ...:.||.:   ::.||.|...:.            :::.|...::|:.||
 Worm    89 -VLQKKGGGEPEPLYTLWRDDDE---TIKKLKTADMKK------------IKKDLQASIKELVTE 137

  Fly   144 LETSSENICVQAEEHIHSSEIIL--TLGHSRSVENFLKRAIKKRQFLTIIVAECAPACRGHNLAA 206
            :|:|.|.|..|:.|.:.:::::|  :|..|:::.|||..|:|              :.|.|.:..
 Worm   138 IESSRECIASQSTELLFNNDVVLVHSLRSSQTMHNFLSHAVK--------------SGRKHRVID 188

  Fly   207 SLANEKNVEIVVIPDAA-------IFAMMSRVNKVIIGTHSVLANGGLRAACGAYTVALAAKHYS 264
            .:..|:::|..  ||.|       :.:.|...:||::...:...:|......|.:.:||.||.:.
 Worm   189 VVDEEEHIEST--PDFATAIELYEVASKMPEASKVVLVAAAYFPDGSCLVPAGGHQIALLAKRHC 251

  Fly   265 VPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPYDSIPAREAKVYS---PMFDYVPPELVTLFI 326
            |||.||||.|||.|..:...|:.:..  ..:.:|:| :.|:.|.:..   |.||.:..:|||||:
 Worm   252 VPVYVLAPFYKLCPFFMTNPDSLHTF--RSNSLPFD-LSAKSAGLVDCLHPAFDCLQSDLVTLFV 313

  Fly   327 SNTGGHAPSYVYRLLTELYHPEDL 350
            |||....||:|.||..:.||.:|:
 Worm   314 SNTSCVIPSHVNRLKEDYYHSQDI 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BbetaNP_570020.1 GCD2 8..345 CDD:275543 91/342 (27%)
IF-2B 21..334 CDD:279362 86/331 (26%)
eif-2BbetaNP_493014.1 GCD2 <124..332 CDD:275543 66/226 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159816
Domainoid 1 1.000 95 1.000 Domainoid score I4672
eggNOG 1 0.900 - - E1_COG1184
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I3446
Isobase 1 0.950 - 0 Normalized mean entropy S1701
OMA 1 1.010 - - QHG54382
OrthoDB 1 1.010 - - D396237at33208
OrthoFinder 1 1.000 - - FOG0005038
OrthoInspector 1 1.000 - - oto18900
orthoMCL 1 0.900 - - OOG6_102470
Panther 1 1.100 - - LDO PTHR45859
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R372
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.790

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