DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ugalt and Slc35c2

DIOPT Version :9

Sequence 1:NP_001138149.1 Gene:Ugalt / 31255 FlyBaseID:FBgn0024994 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001239502.1 Gene:Slc35c2 / 228875 MGIID:2385166 Length:364 Species:Mus musculus


Alignment Length:362 Identity:79/362 - (21%)
Similarity:139/362 - (38%) Gaps:69/362 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LGLSMRYARTRPGDIFLSSTAVLMAEFAKLITCLFL--VFNEEGKDAQKFVRSLHKT-IIANPMD 98
            |||.:.|.....|..|.:........|...:|.|.|  :|............|.||. ::.:..|
Mouse    18 LGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHKARVVLSWTD 82

  Fly    99 TLKVCVPSL------VYIVQNNLLYVSASHLDAATYQVTYQLKILTTAMFAVVILRRKLLNTQWG 157
            .|:...|:.      |.:...:.||::.|     .|.:|....:|...:|:::....:|.    .
Mouse    83 YLRRVAPTALATALDVGLSNWSFLYITVS-----LYTMTKSSAVLFILIFSLIFKLEELR----A 138

  Fly   158 ALLLLVMGIVLVQLAQTEGPTSGSAGGAAAAATAASSGGAPEQNRMLGLWAALGACFLSGFAGIY 222
            ||:|:|:.|               |||.......::      |..:.|....|||.|:.|.....
Mouse   139 ALVLVVLLI---------------AGGLFMFTYKST------QFNVEGFALVLGASFIGGIRWTL 182

  Fly   223 FEKILKGAEISV-----WMRNVQ-LSLLSIPFGLLTCF----VNDGSRIFDQGFFKGYDLFVWYL 277
            .:.:|:.|::.:     .|.::| |..|.: |.|...|    ::...:||.   |:...|.:|.|
Mouse   183 TQILLQKADLGLQNPIDTMFHLQPLMFLGL-FPLFAIFEGLHLSTSEKIFR---FQDTGLLLWVL 243

  Fly   278 VLLQAGGGLIVAVVVKYADNILKGFATSLAIIIS------C--VASIYIFDFNLTLQFSFGAGLV 334
            ..|..||  |:|..:.:::.:|....:||.:.|:      |  :.:.::....::|....|..|.
Mouse   244 GSLLLGG--ILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALC 306

  Fly   335 IASIFLYG-----YDPARSAPKPTMH-GPGGDEEKLL 365
            ::.|.|:.     :......|||... |...|.|.||
Mouse   307 LSGISLHVALKALHSRGDGGPKPLKSLGSSADLELLL 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UgaltNP_001138149.1 Nuc_sug_transp 18..342 CDD:282054 71/331 (21%)
EamA 101..341 CDD:304911 54/263 (21%)
Slc35c2NP_001239502.1 TPT_S35C2 80..327 CDD:411044 57/282 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0697
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.