DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ugalt and srf-3

DIOPT Version :9

Sequence 1:NP_001138149.1 Gene:Ugalt / 31255 FlyBaseID:FBgn0024994 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001255676.1 Gene:srf-3 / 187393 WormBaseID:WBGene00005153 Length:368 Species:Caenorhabditis elegans


Alignment Length:340 Identity:162/340 - (47%)
Similarity:213/340 - (62%) Gaps:22/340 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPAPVTYSYSHRTVNANTLKYISLLTLTLQNAILGLSMRYARTRPGD-IFLSSTAVLMAEFAKLI 67
            :|.|:.......:.:...:|...|:.|||||:|..|.:||:|.|..| :|:|:.||.:.|..|..
 Worm    23 IPVPLVSVGRESSQSKGNMKTAILIWLTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCF 87

  Fly    68 TCLFLVFNEEGKDAQKFVRSLHKTIIANPMDTLKVCVPSLVYIVQNNLLYVSASHLDAATYQVTY 132
            .|||||..||  ..::|:.:|...|:..|.||||||:|:::|||||||.||:||||||||:.:|.
 Worm    88 ICLFLVAQEE--TPRRFIHALRTQILEQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATFMITS 150

  Fly   133 QLKILTTAMFAVVILRRKLLNTQWGALLLLVMGIVLVQLAQTEGPTSGSAGGAAAAATAASSGGA 197
            ||||.|.|:|.|:||||.|..|||.||.:|.:|:.||||..|:              ...|||.:
 Worm   151 QLKIFTAAIFTVIILRRSLNRTQWFALAVLFVGVSLVQLQGTK--------------AKESSGES 201

  Fly   198 PEQNRMLGLWAALGACFLSGFAGIYFEKILKG-AEISVWMRNVQLSLLSIPFGLLTCFVNDGSRI 261
            |    .:|..|.:.||.||||||||||||||| |.:|:||||||:::.|||......::.|...:
 Worm   202 P----FVGFVAVVVACCLSGFAGIYFEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTV 262

  Fly   262 FDQGFFKGYDLFVWYLVLLQAGGGLIVAVVVKYADNILKGFATSLAIIISCVASIYIFDFNLTLQ 326
            .:.|...|:|..||..||....|||.|||.:||||||.|.||||:|||:|.:.||::|||..:..
 Worm   263 NEYGLLYGFDSIVWLTVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFIPSFT 327

  Fly   327 FSFGAGLVIASIFLY 341
            |..||.|||.|||||
 Worm   328 FLLGASLVIFSIFLY 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UgaltNP_001138149.1 Nuc_sug_transp 18..342 CDD:282054 160/326 (49%)
EamA 101..341 CDD:304911 124/240 (52%)
srf-3NP_001255676.1 Nuc_sug_transp 40..343 CDD:282054 160/323 (50%)
EamA 119..342 CDD:304911 124/240 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165424
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38085
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57961
OrthoDB 1 1.010 - - D540031at33208
OrthoFinder 1 1.000 - - FOG0000573
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100998
Panther 1 1.100 - - LDO PTHR10231
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R502
SonicParanoid 1 1.000 - - X1127
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.890

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