DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2662 and scml4

DIOPT Version :9

Sequence 1:NP_001284832.1 Gene:CG2662 / 31254 FlyBaseID:FBgn0024993 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_001332433.4 Gene:scml4 / 794170 ZFINID:ZDB-GENE-041210-338 Length:475 Species:Danio rerio


Alignment Length:508 Identity:97/508 - (19%)
Similarity:153/508 - (30%) Gaps:180/508 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QSKDEDKEESPVQPTTHNS--------SAGSNGHDAKSPVVTTA--------------------- 38
            ||....::.:|  ||...|        |..|.|.:.:||.|.:.                     
Zfish    52 QSGRRPRDRTP--PTCSQSLMSIPAAPSVQSGGGEMQSPGVISPSFLPPASGKVPGRKRGRPPLK 114

  Fly    39 ---------PAATCSVSVSDASGAGASVRTTGRVKKPKQVYDPSDNYVSRASSNRNSLSSVPATS 94
                     |.:...:.|....|.....:...|:..|..:..||.......||.....:::|.::
Zfish   115 RHPEYQSRYPESLPPIKVPKKRGRKPGFKLKSRLMTPLAISPPSSTPEPDMSSIPQDAATIPHSA 179

  Fly    95 NVQSPPVKEATDSQDSTTSPVSEQQQQQ-------------LQQAAQ------------------ 128
            ..|...|....:.|.:|...:..|:..|             ||||.|                  
Zfish   180 TPQVLTVCIYVNKQVNTGPNLDRQKVLQLPDHLGPARPSVVLQQAVQGCIDSAFQQKAVFTLLTE 244

  Fly   129 -------LRNFDTCQKCGKSEPKRGSGHKSNFL--TCKGCMQKWHFPCLPITFHNQSTARKKFKC 184
                   ...||..|...........|:...||  .|:..:.:..|...||...:..::...|..
Zfish   245 GYGGEKISATFDGKQHLLSLPVVNSVGYVLRFLKKLCRSLLCENLFSDQPIAPSSSPSSSSSFHM 309

  Fly   185 DKCRYCRLCNVRGPGLSICSLCVDAYHPDCNDPTLKQSKAVEANPNWRCFRCEACNIGGSTS--A 247
            :|         ...|.|..:..||.||.|..:|     |....:|:         :.|..:|  |
Zfish   310 EK---------HSDGQSKSNSMVDDYHGDSVEP-----KRYSVDPS---------DFGAMSSPYA 351

  Fly   248 SSEEQTGARKSTASREDQAQPVVPRKSNAGRKKRVQSEPTGQEKAAKIEKLAKRRQPLKTEKKKE 312
            :|:...|.|.::|             .:.|..::..|..|..|                 ..:..
Zfish   352 ASKPAYGFRSASA-------------YSGGICRQAASPSTFPE-----------------GNRSA 386

  Fly   313 YKKEEDEEPAQIKVKVEKVEPVDMETEQIENNDLPGPEQESLSLRLTPITAVERRSHPVSTWSVE 377
            |....|  ..::|                     |.|.::.                  |.|||:
Zfish   387 YSPSPD--AGEVK---------------------PPPSKDP------------------SRWSVD 410

  Fly   378 QVVQFVAKRYPK----EANVFRYQDIDGASLLLLNRHDVMNGFGLKLGPALRV 426
            :||.|:....|:    ...:||..:|||.:||||....:|...||||||||::
Zfish   411 EVVWFIKDADPQALGPHVELFRKHEIDGDALLLLKSDMIMKYLGLKLGPALKL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2662NP_001284832.1 PHD 134..187 CDD:214584 9/54 (17%)
PHD 189..236 CDD:214584 10/46 (22%)
SAM_Atherin-like 371..438 CDD:188982 26/60 (43%)
SAM 371..436 CDD:197735 26/60 (43%)
scml4XP_001332433.4 DUF3588 185..293 CDD:288954 18/107 (17%)
SAM_Scm 401..472 CDD:188977 26/81 (32%)
SAM 404..472 CDD:197735 26/78 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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