DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2662 and samd1a

DIOPT Version :9

Sequence 1:NP_001284832.1 Gene:CG2662 / 31254 FlyBaseID:FBgn0024993 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001303918.1 Gene:samd1a / 768149 ZFINID:ZDB-GENE-061013-517 Length:377 Species:Danio rerio


Alignment Length:437 Identity:93/437 - (21%)
Similarity:146/437 - (33%) Gaps:170/437 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KQSKDEDKEESPVQPTTHNSSAG----SNGHDAKSPVVTTAPAATCSVSVSDASGAGASVRTTGR 62
            :|||...|:.||...:..:|:.|    .:..|.:..:.|||             |..:|:...| 
Zfish    81 EQSKCAGKQPSPADWSAGDSAQGPVDEDHMEDMEDEMSTTA-------------GMDSSMDEEG- 131

  Fly    63 VKKPKQVYDPSDNYVSRASSNRNS-LSSVPATSNVQSPPVKEATDSQDSTTSPVSEQQQQQLQQA 126
                    |.|......|.|..:| :|..|.||:..|.|:...|.|::   ||..:..:|:...|
Zfish   132 --------DESSLDAMCAQSTADSGISMSPITSSNTSLPLPSPTSSKN---SPTHDDLRQEADSA 185

  Fly   127 AQLRNFDTCQKCGKSEPKRGSGHKSNFLTCKGC---MQKWHFPCLPITFHNQSTARKKFKCDKCR 188
            ..|           .|..:.||.:..     ||   :|:....|||:                  
Zfish   186 YTL-----------PEHMQPSGQQDT-----GCVVLVQQPQAICLPV------------------ 216

  Fly   189 YCRLCNVRGPGLSICSLCVDAYHPDCNDPTLKQSKAVEANPNWRCFRCEACNIGGSTSASSEEQT 253
                                          ||....::|.               .::.:.:|..
Zfish   217 ------------------------------LKVEDGLQAE---------------ESTLTHDELM 236

  Fly   254 GARKSTASREDQAQPVVPRKSNAGRKKRVQSEPTGQEKAAKIEKLAKRRQPLKTEKKKEYKKEED 318
            ..|..|.   |:|.     ||:.|  ....|:.|.:.:..                .||.|...:
Zfish   237 SERTVTL---DEAV-----KSDGG--SHAVSDHTEEGEIC----------------NKESKSVAE 275

  Fly   319 EEPAQIKVKVEKVEPVDMETEQIEN-NDLPGPEQESLSLRLTPITAVERRSHPVSTWSVEQVVQ- 381
            ||              .:.:.:|.| ||:                ..|..|.....|||..|.: 
Zfish   276 EE--------------TINSGEINNGNDV----------------IKEEISQDPLLWSVADVARY 310

  Fly   382 FVAKRYPKEANVFRYQDIDGASLLLLNRHDVMNGFGLKLGPALRVFE 428
            |.:..:|::|..||.|:|||.||||:.|.||:.|..::|||||:::|
Zfish   311 FTSVGFPEQALAFRTQEIDGKSLLLMQRSDVLTGLSIRLGPALKIYE 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2662NP_001284832.1 PHD 134..187 CDD:214584 9/55 (16%)
PHD 189..236 CDD:214584 3/46 (7%)
SAM_Atherin-like 371..438 CDD:188982 27/59 (46%)
SAM 371..436 CDD:197735 27/59 (46%)
samd1aNP_001303918.1 SAM_Atherin-like 299..367 CDD:188982 27/59 (46%)
SAM 299..355 CDD:197735 26/55 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004693
OrthoInspector 1 1.000 - - otm25507
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.100

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