DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2662 and phc2b

DIOPT Version :9

Sequence 1:NP_001284832.1 Gene:CG2662 / 31254 FlyBaseID:FBgn0024993 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_957496.3 Gene:phc2b / 394177 ZFINID:ZDB-GENE-040426-1113 Length:890 Species:Danio rerio


Alignment Length:433 Identity:96/433 - (22%)
Similarity:161/433 - (37%) Gaps:88/433 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EESPVQPTTHNSSAGSNGHDAKSPVVTTAPAATCSVSVSDASGAGASVRTT--GRVKKPKQVYDP 72
            |:|........|....:...|:.|......::..|...|:...|.....||  |..|.|:.:..|
Zfish   536 EQSKADTVNATSQTQGSVETAREPTGAQLTSSMTSAVSSEPPPAAVMGNTTQNGENKPPQAIVKP 600

  Fly    73 SD-NYVSRASSNRNSLSSVPATSNVQSPPVKEATDSQDSTTSPVSEQQQQQLQQAAQLRNFDTCQ 136
            .. .:|......:......|    |:.|||...:..:..|..| |:.::.....:....|.|| :
Zfish   601 HVLTHVIEGFVIQEGAEPFP----VERPPVAAESPKKPDTQLP-SDPEKTASSNSLSATNSDT-E 659

  Fly   137 KCGKSEPKRGSGHKSNFLTCKGCMQKWHFPCLPITFHNQSTARKKFKCDKCRYCRLCNVRGPGLS 201
            :.|:.:.:.....:...|||:.|  .|      :.|.:      |||..| |:|.:...:...:|
Zfish   660 EAGQQDTRVEEETEKPKLTCELC--GW------VDFAH------KFKRSK-RFCSMVCAKRYSVS 709

  Fly   202 ICSLCVDAYHPDCNDPTLKQSKAVEANPNWRCFRCEACNIGGSTSASSEEQTGARKSTASREDQA 266
             |:..|..:.||       ::|:......||..|        |.|....|....|.| .|::.|.
Zfish   710 -CTKRVGLFRPD-------RTKSTNQINQWRRRR--------SHSPRGREAKKQRLS-VSQQSQG 757

  Fly   267 QPVVPRKSNAGRKKRVQSEPTGQEKA--AKIEKLAKRRQPLKTEKKKEYKKEEDEEPAQIKVKVE 329
            :.:         ...:||:|:..|.:  :.|....:...||..         ....|...:..|.
Zfish   758 ESI---------SSPLQSQPSQGESSPCSDISSYEEATSPLSA---------ASSGPVVSQGVVA 804

  Fly   330 KVEPVDMETEQIENNDLPGPEQESLSLRLTPITAVERRSHPVSTWSVEQVVQFVAKRYP---KEA 391
            ..||          .:||     .||....|....:        |:|::|.:|: :..|   :.|
Zfish   805 ANEP----------EELP-----LLSQHFLPCDPTK--------WNVQEVFEFI-RSLPGCQEIA 845

  Fly   392 NVFRYQDIDGASLLLLNRHDVMNGFGLKLGPALRVFELVMSLQ 434
            :.||.|:|||.:||||....:|:...:||||||::|..:..|:
Zfish   846 DEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKIFARINMLK 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2662NP_001284832.1 PHD 134..187 CDD:214584 11/52 (21%)
PHD 189..236 CDD:214584 9/46 (20%)
SAM_Atherin-like 371..438 CDD:188982 25/67 (37%)
SAM 371..436 CDD:197735 25/67 (37%)
phc2bNP_957496.3 TFIIA 389..>554 CDD:281188 3/17 (18%)
PHC2_SAM_assoc 708..820 CDD:293222 31/161 (19%)
SAM_Ph1,2,3 822..889 CDD:188976 25/76 (33%)
SAM 823..890 CDD:197735 25/75 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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