Protein Alignment Lint-O and Phc3

DIOPT Version :10

• Sequence 1: NP_570018.1
• Gene: Lint-O / 31254
• FlyBaseID: FBgn0024993
• Length: 446
• Species: Drosophila melanogaster
• Sequence 2: XP_006535530.1
• Gene: Phc3 / 241915
• MGIID: 2181434
• Length: 1009
• Species: Mus musculus
• Alignment Length: 472
• Identity: 93/472 - (19%)
• Similarity: 155/472 - (32%)
• Gaps: 190/472 - (40%)

  Fly    11 ESPVQPTTHNSSAGSNGHDAKSPVVTTAPAATCSVSVSDASGAGASVRTTGRVKKPKQVYDPS-- 73
            :||..| ||.|        |.:|.:....|:|.|.|.|.||...:...     |.|:.:..|.
Mouse   678 KSPSDP-THAS--------APAPPLLIPAASTRSSSTSLASSTPSLEN-----KPPQAIVKPQIL 728

  Fly    74 ----DNY----------VSRAS-------SNRNSLSSVPATSNVQSPPVKEATDSQDSTTSPVSE 117
                :.:          |||:|       ..|..|.:....|....|.::..|...|::    |:
Mouse   729 THVIEGFVIQEGLEPFPVSRSSLLIEQPVKKRPLLDNQVVNSVCVQPELQNNTKHADNS----SD 789

  Fly   118 QQQQQLQQAAQLRNFDT----CQKCGKSEPKRGSGHKSNFLTCKGCMQKWHFPCLPITFHNQSTA 178
            .:.:.:.....|...|:    |:.|||      .|:.:.||..|
Mouse   790 TEIEDMMAEETLEEMDSELLKCEFCGK------MGYPNEFLRSK--------------------- 827

  Fly   179 RKKFKCDKCRYCRLCNVRGPGLSICSLCVDAYHPDCNDPTLKQSKAVEANPNWRCFRCEACNIGG 243
                     |:|.:.            |...|:..|
Mouse   828 ---------RFCTMS------------CAKRYNVSC----------------------------- 842

  Fly   244 STSASSEEQTGARKSTASREDQAQPVVPRKSNAGRKKRVQSEPTGQEKAAK-------------- 294
                       ::|...||.::.    |...:.|.:.|   .|:|.|.||:
Mouse   843 -----------SKKFALSRWNRK----PDNQSLGHRGR---RPSGPEGAAREHILRQLPITYPSA 889

  Fly   295 IEKLAKRRQP----LKTEKKKEYKKEEDEEPAQIKVKVEKVEPVDMETEQIENNDLPGPEQESLS 355
            .|.:|....|    :.|..:::.::|.:.|...::::           :..||:|
Mouse   890 EEDVASHEDPVPSAMTTRLRRQSERERERELRDVRIR-----------KMPENSD---------- 933

  Fly   356 LRLTPITAVERRSHPVSTWSVEQVVQFVAKRYP---KEANVFRYQDIDGASLLLLNRHDVMNGFG 417
              |.|:...|     .|.|:|:.|..|: ...|   ..|:.||.|:|||.:||||....:|:...
Mouse   934 --LLPVAQTE-----PSIWTVDDVWAFI-HSLPGCQDVADEFRAQEIDGQALLLLKEDHLMSAMN 990

  Fly   418 LKLGPALRVFELVMSLQ 434
            :||||||::...:.||:
Mouse   991 MKLGPALKICARINSLK 1007

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lint-O	NP_570018.1	PHD	134..187	CDD:214584	8/56 (14%)
		PHD	189..236	CDD:214584	4/46 (9%)
		SAM_Atherin-like	371..438	CDD:188982	26/67 (39%)
Phc3	XP_006535530.1	Atrophin-1	310..>644	CDD:460830
		PAT1	<352..>516	CDD:401645
		SAM_Ph1,2,3	940..1008	CDD:188976	27/74 (36%)