Protein Alignment Lint-O and phc3

DIOPT Version :10

• Sequence 1: NP_570018.1
• Gene: Lint-O / 31254
• FlyBaseID: FBgn0024993
• Length: 446
• Species: Drosophila melanogaster
• Sequence 2: XP_004914480.1
• Gene: phc3 / 100496983
• XenbaseID: XB-GENE-6258800
• Length: 973
• Species: Xenopus tropicalis
• Alignment Length: 419
• Identity: 86/419 - (20%)
• Similarity: 147/419 - (35%)
• Gaps: 91/419 - (21%)

  Fly    33 PVVTTAPAATCSVSVSDASGAG---------ASVRTTGRVKKPKQV--YDPSDNYVSRASSNRNS 86
            |.:|::..|:...|.||.|...         |:...:.|..||..:  .|...:.:.:.....:.
 Frog   627 PSITSSVGASVIKSPSDTSHMSIPAPPLLLPAATTRSNRTLKPNSIPGLDKLPHAIVKPQILTHV 691

  Fly    87 LSSVPATSNVQSPPVKEATDSQDSTTSPVSEQQQQQLQQAAQLRNFDTCQKCGKSEPKRGSGHKS 151
            :........|:..||..::...:....|:|...:..|..|....:..:..|.    |...:....
 Frog   692 IEGFVIQEGVEPFPVNRSSLLVEQAVKPLSPLDEGNLNIADMKSDIQSSAKL----PDNSTDTDM 752

  Fly   152 NFLTCKG-CMQKWHFPCLPITFHNQSTARKKFKCDKCRYCRLCNVRGPGLSICSLCVDAYHPDCN 215
            ..||.:. ||.:.....|...|..::....||:..: |:|.|.            |...|    |
 Frog   753 EDLTAEADCMDELECELLACEFCGKTGYPNKFRQSE-RFCSLS------------CAKRY----N 800

  Fly   216 DPTLKQSKAVEANPNWRCFRCEACNIGGSTSASSEEQTGARKSTAS--REDQAQPVVPRKSNAGR 278
            ..:.||....:||...|..|    .:.||..     |.|...|:|.  ||...:..:|    ...
 Frog   801 ANSTKQLGLFKANKTSRWSR----KVDGSIG-----QRGRPSSSAGSVREHYLRQQLP----TAY 852

  Fly   279 KKRVQSEPTGQEKAAKIEKLAKRRQPLKTEKKKEYKKEEDEEPAQIKVKVEKVEPVDMETEQIEN 343
            ....::....||.:.::....:.|:..:.|:::..:::..:.|.|        ...|.:||.
 Frog   853 SYTSEALENSQEDSTRVTMTTRLRRQSEREREERQRRQMRKPPCQ--------RSPDTQTEP--- 906

  Fly   344 NDLPGPEQESLSLRLTPITAVERRSHPVSTWSVEQVVQFVAKRYP---KEANVFRYQDIDGASLL 405
                                        |.|:||.|..|: ...|   ..|:.||.|:|||.:||
 Frog   907 ----------------------------SLWTVEDVWAFI-HALPGCHDIADEFRTQEIDGQALL 942

  Fly   406 LLNRHDVMNGFGLKLGPALRVFELVMSLQ 434
            ||....:|....:||||||::...:.||:
 Frog   943 LLKEDHLMGTMNIKLGPALKICAWINSLK 971

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lint-O	NP_570018.1	PHD	134..187	CDD:214584	10/53 (19%)
		PHD	189..236	CDD:214584	10/46 (22%)
		SAM_Atherin-like	371..438	CDD:188982	27/67 (40%)
phc3	XP_004914480.1	Atrophin-1	348..>645	CDD:460830	6/17 (35%)
		SAM_Ph1,2,3	904..971	CDD:188976	28/98 (29%)