DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spg7 and BCS1

DIOPT Version :9

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_010663.1 Gene:BCS1 / 851981 SGDID:S000002783 Length:456 Species:Saccharomyces cerevisiae


Alignment Length:557 Identity:132/557 - (23%)
Similarity:203/557 - (36%) Gaps:155/557 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QLTPKEVRLMHLRSLSSTAKPPTASDGKTEKHEQPEKGSAKAKDDSSKEKKSAVAAEDGDKSSR- 128
            |.||         :||....|||...|                :||.:||.|.:.   ||..|. 
Yeast    13 QATP---------NLSGVITPPTNETG----------------NDSVREKLSKLV---GDAMSNN 49

  Fly   129 ---AAGEEAASTPTSSSTIGEPGEDPNKNSNENDEKMRSVLTKAVLWLFTIYMFVAF-------- 182
               |||.......|..:.                  .||.:.||...|:. .|.|..        
Yeast    50 PYFAAGGGLMILGTGLAV------------------ARSGIIKASRVLYR-QMIVDLEIQSKDKS 95

  Fly   183 FSLLITPRSERPEGSTRYVS--WNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIKGRKVSS 245
            ::..:|..::.|:..:|::|  .|...|...:|.....|:..|....   |.::||.|..::..|
Yeast    96 YAWFLTWMAKHPQRVSRHLSVRTNYIQHDNGSVSTKFSLVPGPGNHW---IRYKGAFILIKRERS 157

  Fly   246 TIFHMAVADANKFEEKLRDVEKRLGIKDGVPVTYDRQTDTTGRILMLLLVCALLMSIATRMKSIK 310
            .                    |.:.|.:|.|  ::..|.||     |.....|...|....|.|.
Yeast   158 A--------------------KMIDIANGSP--FETVTLTT-----LYRDKHLFDDILNEAKDIA 195

  Fly   311 ------SPLSMDSF----NQMGRAKFTLVDP---FDGG--RGVLFRDVAGLSEAKQEVKEFVDYL 360
                  ..:...||    .:.|:.|...:.|   .|.|  .|:|              .:..|::
Yeast   196 LKTTEGKTVIYTSFGPEWRKFGQPKAKRMLPSVILDSGIKEGIL--------------DDVYDFM 246

  Fly   361 KSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLGAARVRDL 425
            |:.:.|...|....||.||.||||.|||...:|:|.|.......:|.||     ..|...|:..|
Yeast   247 KNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSE-----NNLTDDRLNHL 306

  Fly   426 FKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSGESEQTLNQLLVEMDGMATKEGVLMLASTN 490
            .....:|:  |:.:::|||...:||.|...|..||    .|.:.||..:||:.:.|..:...:||
Yeast   307 MNNMPERS--ILLLEDIDAAFNKRSQTGEQGFHSS----VTFSGLLNALDGVTSSEETITFMTTN 365

  Fly   491 RADILDKALLRPGRFDRHILIDLPTLAERKEIF-----------EKHLSSVKLESPPTTFSQRLA 544
            ..:.||.|::||||.|..:.:...|..:.:::|           :|.::||| |...|..:.:|.
Yeast   366 HPEKLDAAIMRPGRIDYKVFVGNATPYQVEKMFMKFYPGETDICKKFVNSVK-ELDITVSTAQLQ 429

  Fly   545 RLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEY 581
            .|.          |.|:.|.|.|  .:|..|.:|..:
Yeast   430 GLF----------VMNKDAPHDA--LKMVSSLRNANH 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 FtsH_ext 171..276 CDD:284011 20/114 (18%)
FtsH_fam 333..787 CDD:273520 73/262 (28%)
AAA 378..513 CDD:278434 45/134 (34%)
Peptidase_M41 595..785 CDD:279742
BCS1NP_010663.1 HflB <1..456 CDD:223541 132/557 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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