DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and FTSH12

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_565212.1 Gene:FTSH12 / 844294 AraportID:AT1G79560 Length:1008 Species:Arabidopsis thaliana


Alignment Length:890 Identity:214/890 - (24%)
Similarity:368/890 - (41%) Gaps:204/890 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QPPRIGRELSLLQLSRRQVMQLQAEYKAIV-----GLI---ARSL--QLTPKEVRLMHLRSLSST 82
            |.||:.||       ||::.:...|  |::     |.|   .|::  :.|||.::|.....    
plant   175 QAPRVERE-------RRELTESFME--ALIPEPSPGNIEKFKRNMWRKATPKGLKLKRFIE---- 226

  Fly    83 AKPPTASDGKTEKHEQPEKGSAKAKDDSSKEKKSAVAAEDGDKSSRAAGEEAASTPTSSSTIGEP 147
                 |.|| |..|:....|. .|.||..:..:.::....|    |.|..:..:....|..:|..
plant   227 -----APDG-TLVHDSSYVGE-NAWDDDLETTEGSLKKIIG----RNARIQTEAKKKLSQDLGVS 280

  Fly   148 GEDPNKNSNEND-----------EKMRSVLTKAVLWLFTIYMFVAFFSLL---------ITPRSE 192
            ||..:...|..:           ||:...|..:..      .:|..|.:.         :..|:.
plant   281 GEIGDSVGNWRERLATWKEMLEREKLSEQLNSSAA------KYVVEFDMKEVEKSLREDVIGRTS 339

  Fly   193 RPEGST---------RY---VSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIKGRKVSS 245
            ..||:.         ||   :.:..|: ..|...||..::...|::.:.:.:.||..::      
plant   340 ETEGTRALWISKRWWRYRPKLPYTYFL-QKLDSSEVAAVVFTEDLKRLYVTMKEGFPLE------ 397

  Fly   246 TIFHMAVADANKFEEKLRDVEKRLGIKDGVPVTYDRQTDTTGRILMLLL----------VCALLM 300
                 .:.|. ..:..|.:.....|::  |.:...||.....::.:.||          ..|:|:
plant   398 -----YIVDI-PLDPYLFETICNAGVE--VDLLQKRQIHYFMKVFIALLPGILILWFIRESAMLL 454

  Fly   301 SIATRMKSIKSPLSMDSFNQMGRAKFTLVDPFDGGRGVLF-RDVAGLSEAKQEVKEFV------- 357
            .|.::....|      .:||:          ||......| ..|..:||.|...||.|       
plant   455 LITSKRFLYK------KYNQL----------FDMAYAENFILPVGDVSETKSMYKEVVLGGDVWD 503

  Fly   358 ------DYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGG 416
                  .|:.:|.:|........||.||.||||.||||.|:.:|.|:.:||:..:|:||.:....
plant   504 LLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKS 568

  Fly   417 LGAARVRDLFKEGKKRAPCIIYIDEIDAIG--------RQRSGTESMGQGSSGESEQTLNQLLVE 473
             |||::.::|...::.||..:::||||||.        |:|:..|::.....||.|:|      .
plant   569 -GAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKT------G 626

  Fly   474 MDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLESPPTT 538
            :|..:.::.|:.:.:|||.|.||...:|.||.||.:.|.||...:|.:||..| |:.|..:....
plant   627 IDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVH-SAGKNLAEDID 690

  Fly   539 FSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVER-LVGG---------TEKR 593
            |.:.:.| |.|||||||.|:.||||:.:.|..:..:..:::...::: |:.|         .:|.
plant   691 FGKLVFR-TVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGMGVLLTEEEQQKC 754

  Fly   594 SHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQH-----LYSK 653
            ..::|..:::::|.||:||.::..:.|..|             ...|:|..|..:.     .|.:
plant   755 EQSVSYEKKRLLAVHEAGHIVLAHLFPRFD-------------WHAFSQLLPGGKETAVSVFYPR 806

  Fly   654 EELFD-----------KMCMALGGRAAENLVF-NRITTGAQNDLEKVTKIAYS-----QIKKFGM 701
            |::.|           :|.:|.|||.||.:|| :.:|.|.::||||:||||..     |..:.|:
plant   807 EDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGDNVTDGGKDDLEKITKIAREMVISPQSARLGL 871

  Fly   702 NDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGILTTHRDKLEK 766
            ...:..|.:.|..:...|..:......|.....|..::       .|...|.|  ||.:.::.|:
plant   872 TQLVKKIGMVDLPDNPDGELIKYRWDHPHVMPAEMSVE-------VSELFTRE--LTRYIEETEE 927

  Fly   767 LAEALLEKETLDYDQVVQLIGPPPYDLGKRQVESVEFEQSLKNLS 811
            ||...|.......|.:.:.:      |.|.::..:|.|:.:|:||
plant   928 LAMNALRANRHILDLITREL------LEKSRITGLEVEEKMKDLS 966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 171/694 (25%)
FTSH12NP_565212.1 HflB 358..964 CDD:440233 168/673 (25%)

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