DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spg7 and FTSH12

DIOPT Version :9

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_565212.1 Gene:FTSH12 / 844294 AraportID:AT1G79560 Length:1008 Species:Arabidopsis thaliana


Alignment Length:890 Identity:214/890 - (24%)
Similarity:368/890 - (41%) Gaps:204/890 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QPPRIGRELSLLQLSRRQVMQLQAEYKAIV-----GLI---ARSL--QLTPKEVRLMHLRSLSST 82
            |.||:.||       ||::.:...|  |::     |.|   .|::  :.|||.::|.....    
plant   175 QAPRVERE-------RRELTESFME--ALIPEPSPGNIEKFKRNMWRKATPKGLKLKRFIE---- 226

  Fly    83 AKPPTASDGKTEKHEQPEKGSAKAKDDSSKEKKSAVAAEDGDKSSRAAGEEAASTPTSSSTIGEP 147
                 |.|| |..|:....|. .|.||..:..:.::....|    |.|..:..:....|..:|..
plant   227 -----APDG-TLVHDSSYVGE-NAWDDDLETTEGSLKKIIG----RNARIQTEAKKKLSQDLGVS 280

  Fly   148 GEDPNKNSNEND-----------EKMRSVLTKAVLWLFTIYMFVAFFSLL---------ITPRSE 192
            ||..:...|..:           ||:...|..:..      .:|..|.:.         :..|:.
plant   281 GEIGDSVGNWRERLATWKEMLEREKLSEQLNSSAA------KYVVEFDMKEVEKSLREDVIGRTS 339

  Fly   193 RPEGST---------RY---VSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIKGRKVSS 245
            ..||:.         ||   :.:..|: ..|...||..::...|::.:.:.:.||..::      
plant   340 ETEGTRALWISKRWWRYRPKLPYTYFL-QKLDSSEVAAVVFTEDLKRLYVTMKEGFPLE------ 397

  Fly   246 TIFHMAVADANKFEEKLRDVEKRLGIKDGVPVTYDRQTDTTGRILMLLL----------VCALLM 300
                 .:.|. ..:..|.:.....|::  |.:...||.....::.:.||          ..|:|:
plant   398 -----YIVDI-PLDPYLFETICNAGVE--VDLLQKRQIHYFMKVFIALLPGILILWFIRESAMLL 454

  Fly   301 SIATRMKSIKSPLSMDSFNQMGRAKFTLVDPFDGGRGVLF-RDVAGLSEAKQEVKEFV------- 357
            .|.::....|      .:||:          ||......| ..|..:||.|...||.|       
plant   455 LITSKRFLYK------KYNQL----------FDMAYAENFILPVGDVSETKSMYKEVVLGGDVWD 503

  Fly   358 ------DYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGG 416
                  .|:.:|.:|........||.||.||||.||||.|:.:|.|:.:||:..:|:||.:....
plant   504 LLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKS 568

  Fly   417 LGAARVRDLFKEGKKRAPCIIYIDEIDAIG--------RQRSGTESMGQGSSGESEQTLNQLLVE 473
             |||::.::|...::.||..:::||||||.        |:|:..|::.....||.|:|      .
plant   569 -GAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKT------G 626

  Fly   474 MDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLESPPTT 538
            :|..:.::.|:.:.:|||.|.||...:|.||.||.:.|.||...:|.:||..| |:.|..:....
plant   627 IDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVH-SAGKNLAEDID 690

  Fly   539 FSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVER-LVGG---------TEKR 593
            |.:.:.| |.|||||||.|:.||||:.:.|..:..:..:::...::: |:.|         .:|.
plant   691 FGKLVFR-TVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGMGVLLTEEEQQKC 754

  Fly   594 SHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQH-----LYSK 653
            ..::|..:::::|.||:||.::..:.|..|             ...|:|..|..:.     .|.:
plant   755 EQSVSYEKKRLLAVHEAGHIVLAHLFPRFD-------------WHAFSQLLPGGKETAVSVFYPR 806

  Fly   654 EELFD-----------KMCMALGGRAAENLVF-NRITTGAQNDLEKVTKIAYS-----QIKKFGM 701
            |::.|           :|.:|.|||.||.:|| :.:|.|.::||||:||||..     |..:.|:
plant   807 EDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGDNVTDGGKDDLEKITKIAREMVISPQSARLGL 871

  Fly   702 NDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGILTTHRDKLEK 766
            ...:..|.:.|..:...|..:......|.....|..::       .|...|.|  ||.:.::.|:
plant   872 TQLVKKIGMVDLPDNPDGELIKYRWDHPHVMPAEMSVE-------VSELFTRE--LTRYIEETEE 927

  Fly   767 LAEALLEKETLDYDQVVQLIGPPPYDLGKRQVESVEFEQSLKNLS 811
            ||...|.......|.:.:.:      |.|.::..:|.|:.:|:||
plant   928 LAMNALRANRHILDLITREL------LEKSRITGLEVEEKMKDLS 966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 FtsH_ext 171..276 CDD:284011 17/125 (14%)
FtsH_fam 333..787 CDD:273520 142/507 (28%)
AAA 378..513 CDD:278434 51/142 (36%)
Peptidase_M41 595..785 CDD:279742 50/211 (24%)
FTSH12NP_565212.1 FtsH_fam 429..963 CDD:273520 155/586 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43655
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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