DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spg7 and FTSH1

DIOPT Version :9

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_564563.1 Gene:FTSH1 / 841447 AraportID:AT1G50250 Length:716 Species:Arabidopsis thaliana


Alignment Length:765 Identity:278/765 - (36%)
Similarity:410/765 - (53%) Gaps:121/765 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LRSLS----------STAKPPTASDGKTEKHEQPEKGSAKAK---DDSSKEKKSAVAAEDGDKSS 127
            |||.|          |:..|.|     |.|...|....::||   ..||:::.|.....:...||
plant     7 LRSSSNFFLGSHIIISSPTPKT-----TRKPSFPFSFVSRAKYQITRSSQDENSPNGKPNSPFSS 66

  Fly   128 RAA-----GEEAASTPTSSSTIGEPGEDPN--------KNSNENDEKMRSVLTKAVLWLFTIYMF 179
            :.|     ....:|:|.:.:.:.||. .|:        |.|..:...:::.:.||.         
plant    67 QVALAAILLSSISSSPLALAVVDEPA-SPSVVIESQAVKPSTPSPLFIQNEILKAP--------- 121

  Fly   180 VAFFSLLITPR-SERPEGST-RYVSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIKGRK 242
                    :|: |:.||||. ||   :||: :.:..|:|:.:....|..:|.:     ..:..|:
plant   122 --------SPKSSDLPEGSQWRY---SEFL-NAVKKGKVERVRFSKDGSVVQL-----TAVDNRR 169

  Fly   243 VSSTIFHMAVADANKFEEKLRDVEKRLGIKDGVPVTYDRQTD---TTGRILMLLLVCALLMSIAT 304
            .|..:.:         :..|.|:....|:...|........|   ..|.::..||....|..:..
plant   170 ASVIVPN---------DPDLIDILAMNGVDISVSEGESSGNDLFTVIGNLIFPLLAFGGLFLLFR 225

  Fly   305 RMKSIKSPLSMDSFNQMGRAKFTLVDPFDGGR-----------GVLFRDVAGLSEAKQEVKEFVD 358
            |.:.  .|         |.....|..|.|.||           ||.|.||||..:||.|::|.||
plant   226 RAQG--GP---------GGGPGGLGGPMDFGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVD 279

  Fly   359 YLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLGAARVR 423
            :||:|:||..||||:|:|.||:||||.||||||:|||.||.|||.|...|||:|:..|:||:|||
plant   280 FLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVR 344

  Fly   424 DLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSGESEQTLNQLLVEMDGMATKEGVLMLAS 488
            |||::.|.:||||::||||||:||||..  .|| |.:.|.|||:||||.||||.:...||::||:
plant   345 DLFEKAKSKAPCIVFIDEIDAVGRQRGA--GMG-GGNDEREQTINQLLTEMDGFSGNSGVIVLAA 406

  Fly   489 TNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGA 553
            |||.|:||.||||||||||.:.:|.|.:|.|.:|.:.| |..|.......| .::||.||||:||
plant   407 TNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVH-SRGKALGKDVDF-DKVARRTPGFTGA 469

  Fly   554 DIANVCNEAALHAARNTQMEVSSKNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWM 618
            |:.|:.||||:.|||....|:|...:..|:||::.|.||::..:|..:::::||||:||||||.:
plant   470 DLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGAL 534

  Fly   619 LPNSDILLKVTIVPRTSLALGFAQYTPSEQH----LYSKEELFDKMCMALGGRAAENLVF--NRI 677
            :|..|.:.|::|:|| ..|.|...:.|||:.    |||:..|.::|.:|||||.||.::|  ..:
plant   535 MPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENV 598

  Fly   678 TTGAQNDLEKVTKIAYSQIKKFGMNDTLGPIYVRDADETEGGGAMGS-------GGKKPFSRAME 735
            ||||.||..:|:::|...|::||.:..:|.:.|        ||..|:       ..:|.:|.|..
plant   599 TTGASNDFMQVSRVARQMIERFGFSKKIGQVAV--------GGPGGNPFMGQQMSSQKDYSMATA 655

  Fly   736 SMIDNEARHVVASAYQTTEGILTTHRDKLEKLAEALLEKETLDYDQVVQL 785
            .::|.|.|.:|..||:....|:|||.|.|.|||:.|:||||:|.::.:.|
plant   656 DIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSL 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 FtsH_ext 171..276 CDD:284011 19/106 (18%)
FtsH_fam 333..787 CDD:273520 221/477 (46%)
AAA 378..513 CDD:278434 84/134 (63%)
Peptidase_M41 595..785 CDD:279742 75/202 (37%)
FTSH1NP_564563.1 FtsH_fam 242..706 CDD:273520 221/478 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217929at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.