DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and AT5G40000

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_198816.1 Gene:AT5G40000 / 833997 AraportID:AT5G40000 Length:470 Species:Arabidopsis thaliana


Alignment Length:457 Identity:109/457 - (23%)
Similarity:188/457 - (41%) Gaps:100/457 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 YMFVAFFSLLITPRSERPEGSTRYVSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIKGR 241
            |.|...||.:.|....:....|::          |...:|||              .:|.|:|  
plant    76 YSFNQAFSAIDTYLDSKATDKTKH----------LRGSQVKE--------------SKGLVLK-- 114

  Fly   242 KVSSTIFHMAVADANKFEEKLRDVEKRLGIKDGVPVTYDRQTDTTG-RILML--------LLVCA 297
                           :.|.|:||..|      |..|.::|..|..| |...|        |:..:
plant   115 ---------------RNEAKVRDEYK------GANVWWERVVDNDGNRYYKLTFHNRARTLITNS 158

  Fly   298 LLMSIATRMKSI-----KSPLSMDSFNQ---MGRAKFTLVDPFDGGRGVLFRDVAGLSEAKQE-V 353
            .:..:....|||     ::.|..::.:.   .|:..:..:: |:  ....|:.:|...:.|:| |
plant   159 YIKYVVEEGKSIIVKNKQTRLFTNNLSTQWVFGQNMWRSIE-FE--HPASFQTLAMDPKKKEEIV 220

  Fly   354 KEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLG 418
            .:.:.:....|.|:::|....||.||.||||.||:.:..|:|.     .|:.|..: :|:.....
plant   221 NDLIAFSNGKEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMAN-----LLNYNIYD-LELTAVKN 279

  Fly   419 AARVRDLFKEGKKRAPCIIYIDEIDA--------IGRQRSGTESMGQGSSGESEQTLNQLLVEMD 475
            .:.::.|......::  ||.|::||.        |.::.:..|..|:....|:..||:.||..:|
plant   280 NSELKKLLTATSSKS--IIVIEDIDCSADFTSNRIKKESNSRERYGKEDKDENSVTLSGLLNFID 342

  Fly   476 GM--ATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLESPPTT 538
            |:  |..:..:::.:||..:.||.||:|.||.|.||.:...|. |..:|..|:...:..:.....
plant   343 GIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELSYCTY-EAFKILAKNYLDLDGDDAHPL 406

  Fly   539 FSQRLARL-TPGFSGADIA-NVCNEAALHAARNTQMEVSSKNLEYAVERLVGGTEKRSHALSLAE 601
            ||:..|.| ....|.||:| |:       .|||.|::| .|:|...:..|   .|:..:..|..|
plant   407 FSEIKALLEETKISPADVAENL-------MARNQQIDV-DKSLNLLISAL---EEENQYQRSQQE 460

  Fly   602 RK 603
            :|
plant   461 KK 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 108/456 (24%)
AT5G40000NP_198816.1 AAA_assoc 29..135 CDD:464152 21/105 (20%)
RecA-like_BCS1 219..380 CDD:410918 48/168 (29%)

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