DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and AT5G17760

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_850841.1 Gene:AT5G17760 / 831644 AraportID:AT5G17760 Length:505 Species:Arabidopsis thaliana


Alignment Length:519 Identity:118/519 - (22%)
Similarity:204/519 - (39%) Gaps:119/519 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 TSSSTIGEPGEDPNKNSNENDEKMRSVLTKAVLWLFTIYMFVAFFSLLITPRSERPEGSTRYVSW 203
            :||||:....:|.|...  |:|..|:..|              :.|..|:|.:.|...|..:.  
plant    54 SSSSTLTLTIDDDNMGM--NNEIYRAAQT--------------YLSTKISPDAVRLRISKGHK-- 100

  Fly   204 NEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIK-------------GRK------VSSTIFH 249
            ::.|:..|:.||:...:.. |:::|...:.:|...|             ||:      ..|..|.
plant   101 DKHVNLYLSDGEIVNDVYE-DVQLVWRFVTDGGDKKGGGGGVGGRGGGGGRRGGMDDDGKSEYFE 164

  Fly   250 MAVADANKFEEKLRDVEKRLGIKDGVPVTYDRQTDTTGRILMLLLVCALLMSIATRMKSIKSP-- 312
            ::      |::|.:|                            |::.:.:..|.::.|.|:..  
plant   165 LS------FDKKHKD----------------------------LILNSYVPYIESKAKEIRDERR 195

  Fly   313 -LSMDSFNQMGRAKFTLVDPFDGGRGVLFRDVAGLSEAKQEVKEFVD-YLKSPEKYQRLGAKVPR 375
             |.:.|.|.:......|..|      ..|..:|...:.|::|.|.:| :::..|.|:|:|....|
plant   196 ILMLHSLNSLRWESVILEHP------STFETMAMEDDLKRDVIEDLDRFIRRKEFYKRVGKAWKR 254

  Fly   376 GALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYID 440
            |.||.||||.||:.|..|:|.     :|..:..: :::...:..:.:|.|....:.|:  |:.|:
plant   255 GYLLYGPPGTGKSSLVAAMAN-----YLKFDVYD-LQLASVMRDSDLRRLLLATRNRS--ILVIE 311

  Fly   441 EIDAI----GRQRSGTESMGQGSSGESEQTLNQLLVEMDGMATKEG--VLMLASTNRADILDKAL 499
            :||..    .|.....|...:|.| :...||:.||..:||:.:..|  .:::.:||..|.||.||
plant   312 DIDCAVDLPNRIEQPVEGKNRGES-QGPLTLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPAL 375

  Fly   500 LRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLESPPTTFSQRLARLTPG--------------F 550
            |||||.|.||.:...:....|.:...:|.......|...|.: :.||..|              .
plant   376 LRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDAAMPHRLFPE-IERLIDGEVMTPAQVAEELMKS 439

  Fly   551 SGADIA-----NVCNEAALHAARN--TQMEVSSKNLEYAVERLVGGTEKRSHALSLAERKVIAY 607
            ..||:|     ||..:..|.:..:  ..|:.....||....||...||......|...:|::.:
plant   440 EDADVALEGLVNVLEKMRLKSKESNPVMMKQKESRLEMEEMRLKSDTEGSPRKNSKRFKKLVLF 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 108/480 (23%)
AT5G17760NP_850841.1 AAA_assoc 35..129 CDD:464152 21/93 (23%)
P-loop containing Nucleoside Triphosphate Hydrolases 168..>277 CDD:476819 34/147 (23%)
RecA-like_BCS1 231..387 CDD:410918 54/164 (33%)

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