DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and AT4G25835

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_567730.1 Gene:AT4G25835 / 828689 AraportID:AT4G25835 Length:506 Species:Arabidopsis thaliana


Alignment Length:286 Identity:77/286 - (26%)
Similarity:120/286 - (41%) Gaps:46/286 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 KQEVKE-FVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEM 413
            ||::.| ..|:.:....|:|.|....||.||.||||.||:.:..|:|...:.....:   |..|:
plant   212 KQQIMEDLKDFAECQSFYERTGRAWKRGYLLYGPPGTGKSSMIAAMANYLRYDIYDL---ELTEV 273

  Fly   414 IGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSGESEQ------------- 465
            ...   :.:|.|..  |..:..||.|::||......:..:....||..|.|.             
plant   274 KSN---SELRKLLM--KTSSKSIIVIEDIDCSINLTNRNKKQSTGSYNEPEMLTGSGLGDDLGDG 333

  Fly   466 ---TLNQLLVEMDGMATKEGV--LMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIF-- 523
               ||:.||...||:.:..|.  :.:.:||..:.||.||||.||.|.||.:...|.:..|.:.  
plant   334 NTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRN 398

  Fly   524 -----EKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSS--KNLEY 581
                 |..|:.|.|:.......:  |.:||    ||:    :||.:...|:.:..|..  .:|..
plant   399 YLGFEEGDLNDVVLKELAEVVDR--AEITP----ADV----SEALIKNRRDKERAVRELLVDLRS 453

  Fly   582 AVERLVGGTEKRSHALSLAERKVIAY 607
            .|||.....:.|...:||.|::..|:
plant   454 RVERNEKNGKSRVQNVSLEEQENRAF 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 77/286 (27%)
AT4G25835NP_567730.1 AAA_assoc 26..119 CDD:464152
P-loop containing Nucleoside Triphosphate Hydrolases <160..>261 CDD:476819 19/48 (40%)
RecA-like_BCS1 215..384 CDD:410918 51/176 (29%)
Blue background indicates that the domain is not in the aligned region.

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