DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and AT4G05380

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001319874.1 Gene:AT4G05380 / 825886 AraportID:AT4G05380 Length:460 Species:Arabidopsis thaliana


Alignment Length:236 Identity:69/236 - (29%)
Similarity:108/236 - (45%) Gaps:52/236 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 RGVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQV 400
            :..|.||:...|..|       |:.|:      :|....||.||.||||.||:.|..|:|.    
plant   218 KNTLIRDLDAFSNGK-------DFFKT------VGRAWKRGYLLYGPPGTGKSSLVAAIAN---- 265

  Fly   401 PFLSMNGSEF-IEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRS-GTESMGQGSSGES 463
               .||.|.: :::......|.:|.:....:.|:  |:.|:::|..|...: ..|:..:...||:
plant   266 ---FMNYSIYDLQIQSVKDDAMLRQILTSTENRS--ILLIEDLDCSGADTTCRKENKDETEYGEN 325

  Fly   464 EQ---------TLNQLLVEMDGM--ATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPT-- 515
            :.         ||:.||..:||:  :..|..:::.:||..:.||.|||||||.|.|||:|..|  
plant   326 QNKKKKKDPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTPI 390

  Fly   516 ----LA------ERKEIF---EKHLSSVKLESPPTTFSQRL 543
                ||      |..|:|   ||....||  :.|...:::|
plant   391 VFKKLAALYLEIEEHELFDPIEKMFLEVK--ATPAEITEKL 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 69/236 (29%)
AT4G05380NP_001319874.1 AAA_assoc 37..135 CDD:464152
RecA-like_BCS1 221..384 CDD:410918 55/184 (30%)
Blue background indicates that the domain is not in the aligned region.

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