DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spg7 and AT3G28510

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_189492.1 Gene:AT3G28510 / 822481 AraportID:AT3G28510 Length:530 Species:Arabidopsis thaliana


Alignment Length:320 Identity:81/320 - (25%)
Similarity:128/320 - (40%) Gaps:61/320 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 FRDVAGLSEAKQEV-KEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFL 403
            |..:|...|.|:.: |:.:.:.|..:.|:::|....||.||.||||.||:.:..|:|.     ||
plant   208 FETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIAN-----FL 267

  Fly   404 SMNGSEFIEMIGGLGAARVRDLFKEGKK-----RAPCIIYIDEIDA---IGRQRSGTESMGQGSS 460
            ..:       :..|....|:| ..|.||     .:..||.|::||.   :..||...:...:...
plant   268 DYD-------VYDLELTTVKD-NSELKKLLLDTTSKSIIVIEDIDCSLDLTGQRKKKKEEDEEED 324

  Fly   461 GE---------------SEQTLNQLLVEMDGM--ATKEGVLMLASTNRADILDKALLRPGRFDRH 508
            ||               |:.||:.||..:||:  |.....:::.:||..|.||.||:|.||.|.|
plant   325 GEEKKEGEKKPKVDDKQSKVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPALIRRGRMDNH 389

  Fly   509 ILIDLPTLAERKEIFEKHLS----------SVKLESPPTTFSQRLARLTPGFSGADIANVC---- 559
            |.:........|.:.:.:|.          ..|||....:.:.....|.|. |..:.|::|    
plant   390 IEMSYCKFEAFKVLAKNYLEIETHDLYGEIERKLEETDMSPADVAETLMPK-SDEEDADICIKRL 453

  Fly   560 ---NEAALHAARNTQMEVSSKNLEYAVERLVGGTE----KRSHALSLAERKVIAYHESGH 612
               .|.....||....|...|..|...:::....|    |:.......:.||.|..|:|:
plant   454 VKTLEEEKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKKKKTEEDEKKEKVKAKEENGN 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 81/320 (25%)
AT3G28510NP_189492.1 AAA_assoc 29..124 CDD:464152
RecA-like_BCS1 221..392 CDD:410918 54/183 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.