DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and yme1l1a

DIOPT Version :9

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_005162918.1 Gene:yme1l1a / 793098 ZFINID:ZDB-GENE-091113-41 Length:729 Species:Danio rerio


Alignment Length:784 Identity:239/784 - (30%)
Similarity:392/784 - (50%) Gaps:128/784 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VMQLQAEYKAIVGLIARSLQ--LTPK------------------EVRLMHLRSLSSTAKPPTASD 90
            |..|::...:.|....:|||  |:|:                  |:|:.|:|.:.....|.|   
Zfish    23 VQYLKSSANSAVTASVQSLQKDLSPEHDPLHYEPKVNLKELGLSELRVSHVRDVLERLLPST--- 84

  Fly    91 GKTEKHEQPEKGSAKAKDDSSKEKKSAVAAED--------GDKSSRAAGEEAASTPTSSSTIGEP 147
                  ...||..|....:|:..:.|.::|..        ..|.|...|         ||.....
Zfish    85 ------HPAEKSFASVAQNSTAWRTSHISAPSFFQNKYGFSHKHSGCFG---------SSVFRRG 134

  Fly   148 GEDPNKNSNENDEKMRSVLTKAVLWLFTIYMFVAFFSLLITPRSERPEGSTRYVSWNEFVHHMLA 212
            |..|              |..|.:.|..:.::|.........:|.....|:.             
Zfish   135 GSSP--------------LQAACVDLHHLQLWVQNRGFKTMSKSRHLRSSSE------------- 172

  Fly   213 VGEVKELIIRPDMEMVTIILHEGAVIKGRKVSSTIFHMAVADANKFEEKLRDVEKRLGIKDG--- 274
             |.|       :.:..|.:..:|.::|.:..:.::..:  ...|...|..:|..| .|..:|   
Zfish   173 -GPV-------EADNYTPVFMKGLMMKEKTDTGSLEQL--LKQNNLPESHQDAFK-TGFTEGFMK 226

  Fly   275 VPVTYDRQTDTT--GRILMLLLVCALLMSIATRMKSIKSPL--SMDSFNQMGRAKFT-----LVD 330
            ......|..|:.  .|:::.:|:.|.:..::      :||.  ...||:...|.:.|     .||
Zfish   227 AQALTKRTQDSVKRTRLIIFVLLLAGIYGVS------RSPFFSGKGSFSDTVRFRTTSGLDSSVD 285

  Fly   331 PFDGGRGVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVA 395
            |.. .:.:.|..|.|:.|||.|:::.|::|::|:|:..||.|:|:|.||:||||.||||||:|||
Zfish   286 PVQ-MKNITFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVA 349

  Fly   396 TEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSS 460
            .||.|||...:||||.||..|:||:|:|:||||.|..|||:|:|||:|::|.:|     :.....
Zfish   350 GEADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKR-----IESPMH 409

  Fly   461 GESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEK 525
            ..|.||:||||.||||....|||:::.:||.|:.||.||:||||||..:.:.:|.:..|.||.|.
Zfish   410 PYSRQTINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKGRTEILEW 474

  Fly   526 HLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVERLVGGT 590
            :|..:|::|  ...::.:||.|.|||||::.|:.|:|||.||.:.:..|:.|.|::|.::::.|.
Zfish   475 YLKKIKVDS--AIDAEIIARGTVGFSGAELENLVNQAALKAAADGKDLVTMKELKFAKDKILMGP 537

  Fly   591 EKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTP-SEQHLYSKE 654
            |:||..:....:.:.||||||||:|.:...::..:.|.||:|| ..:||.....| :::...::.
Zfish   538 ERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMPINKATIMPR-GPSLGHVSLLPENDRWSETRA 601

  Fly   655 ELFDKMCMALGGRAAENLVF--NRITTGAQNDLEKVTKIAYSQIKKFGMNDTLGPIYVRDADETE 717
            :|..:|.:::|||.||.|||  ::||:||.:|.:..||||...:.:|||:|.||.:...|..:  
Zfish   602 QLLAQMDVSMGGRVAEELVFGNDQITSGASSDFDGATKIAQMMVTRFGMSDKLGVMTYSDLTK-- 664

  Fly   718 GGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGILTTHRDKLEKLAEALLEKETLDYDQV 782
                     ..|.:||   .::.|.|.::.|:|:..:.||.|:..:.:.||:|||..|||:..::
Zfish   665 ---------HSPETRA---AVEQEIRVLLQSSYERAKKILKTYSKEHKLLADALLTYETLNAKEI 717

  Fly   783 VQLI 786
            ..::
Zfish   718 QMIL 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 FtsH_ext 171..276 CDD:284011 15/107 (14%)
FtsH_fam 333..787 CDD:273520 181/457 (40%)
AAA 378..513 CDD:278434 73/134 (54%)
Peptidase_M41 595..785 CDD:279742 61/192 (32%)
yme1l1aXP_005162918.1 P-loop_NTPase 287..>351 CDD:304359 31/64 (48%)
FtsH_fam 289..722 CDD:273520 181/455 (40%)
AAA 331..461 CDD:278434 73/134 (54%)
Peptidase_M41 542..720 CDD:279742 61/192 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217929at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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