DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spg7 and afg3l2

DIOPT Version :9

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001104667.1 Gene:afg3l2 / 569168 ZFINID:ZDB-GENE-070912-46 Length:800 Species:Danio rerio


Alignment Length:772 Identity:320/772 - (41%)
Similarity:444/772 - (57%) Gaps:90/772 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 RSLSSTAKPPTA-------SDGKTEKHEQPEKGSAKAKDDSSKEKKSAVAAEDGDKS--SRAAGE 132
            |.|||  |||..       :.....|:.:|...:|:.|:......:.......|..|  .:..|.
Zfish    54 RRLSS--KPPKGFEKYFPNNKNGGPKNSEPTPSNAEVKEAKPTNSQKTTGGGGGGSSGGGKRGGR 116

  Fly   133 EAASTPTSSSTIGE-PGEDPNKNSNENDEKMRSVLTKAVLWLFTIYMFVAFFSLLITPRSERPEG 196
            :..||..|....|| |.:|        .|.....|.....||...|.|..           |..|
Zfish   117 KDESTWQSRIQKGEFPWDD--------KEFRMYFLGGTAFWLAMGYYFFI-----------RDGG 162

  Fly   197 STRYVSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAV-IKGRKVSSTIFHMAVADANKFEE 260
              |.|:|.:||:..||.|.|..|.: .:...|.:|...|.. :.|:.|   .|::...|.  ||.
Zfish   163 --REVTWKDFVNSYLAKGVVDRLEV-VNKRYVKVIFTPGKTPVDGQYV---WFNIGSVDT--FER 219

  Fly   261 KLRDVEKRLGI--KDGVPVTYDRQTDTTGRILMLLLVCALLMSIATRMKSIKSPLSMDSFNQMGR 323
            .|...:..|||  ::.:||.|..::|  |..|:.:|...|::.....|.. :.|...   .:.||
Zfish   220 NLETAQLELGIEGENRLPVVYSAESD--GSFLLSMLPTVLIIGFLLFMLR-RGPAGA---GRPGR 278

  Fly   324 ------------AKFTLVDPFDGGRGVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRG 376
                        || .|.|..|    |.|:||||..|||.|:.|||::||:|::||.||||:|:|
Zfish   279 GMGGLFSVSETTAK-VLRDEID----VKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKG 338

  Fly   377 ALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDE 441
            |:|.||||.||||||||.|.||.|||:::|||||:||..|:|.|||||||...:|.||||::|||
Zfish   339 AILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDE 403

  Fly   442 IDAIGRQRSGTESMGQGSSG---ESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPG 503
            |||:||:|      |:|:.|   |.|.|||||||||||..|...|::||.|||.||||.||:|||
Zfish   404 IDAVGRKR------GRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPG 462

  Fly   504 RFDRHILIDLPTLAERKEIFEKHLSSVKLES--PPTTFSQRLARLTPGFSGADIANVCNEAALHA 566
            ||||.|.|..|.:..|..||:.||..:|||:  .....::::|.|||||||||||||||||||.|
Zfish   463 RFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIA 527

  Fly   567 ARNTQMEVSSKNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIV 631
            ||:....::.|:.|.|:||::||.||::..|...|:|.:||||:|||:.||.|.::|.||||:|:
Zfish   528 ARHLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSII 592

  Fly   632 PRTSLALGFAQYTPSEQHLYSKEELFDKMCMALGGRAAENLVFNRITTGAQNDLEKVTKIAYSQI 696
            || ...||:|||.|.||:||:||:|.|:|||.||||.:|.:.|.|||||||:||:|||:.||:||
Zfish   593 PR-GKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLKKVTQSAYAQI 656

  Fly   697 KKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGILTTHR 761
            .:||||:.:|.:   ..|....|..:   .:||:|.|...:||.|.|:::::||:.|:.:|:..:
Zfish   657 VQFGMNEKVGQV---SFDLPRQGELV---LEKPYSEATARLIDTEVRNLISTAYERTQQLLSDKK 715

  Fly   762 DKLEKLAEALLEKETLDYDQVVQLIGPPPYDLGKRQVESVEFEQSLKNL-STDTDAT 817
            .::||:|..|||||.||.:.:|:|:|..|:      .|...:|:.::.. |.|.|.:
Zfish   716 PEVEKVALRLLEKEVLDKNDMVELLGKRPF------AEKSTYEEFVEGTGSVDEDTS 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 FtsH_ext 171..276 CDD:284011 29/107 (27%)
FtsH_fam 333..787 CDD:273520 245/458 (53%)
AAA 378..513 CDD:278434 87/137 (64%)
Peptidase_M41 595..785 CDD:279742 90/189 (48%)
afg3l2NP_001104667.1 FtsH_ext 141..237 CDD:284011 30/114 (26%)
FtsH_fam 248..741 CDD:273520 256/514 (50%)
AAA 340..471 CDD:278434 86/136 (63%)
Peptidase_M41 557..739 CDD:279742 90/188 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D119497at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.