DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and Spg7

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001386039.1 Gene:Spg7 / 353231 RGDID:727940 Length:781 Species:Rattus norvegicus


Alignment Length:778 Identity:378/778 - (48%)
Similarity:517/778 - (66%) Gaps:81/778 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IQLRSATGQPPRIGRELSLLQLSRRQVMQLQAEYKAIVGLIARSLQLTPKEVRLMHLRSLSSTAK 84
            |.|.:|.|..|:     |||      :..|...::.:.||:.:. .:.|..:||..|.  .||..
  Rat    50 IGLAAAGGHTPQ-----SLL------LRILTPSFEGVSGLLLKR-HIVPSAIRLWQLS--GSTLY 100

  Fly    85 PPTASDGKTEKHEQPEKGSAKAKDDSSKEKKSAVAAEDGDKSSRAAGEEAASTPTSSSTIGEPGE 149
            ..|:  |..:|::..:|...||.:|..:|::   ..|..|:..|                     
  Rat   101 FNTS--GLKQKNKDDDKPKGKAPEDDEEERR---RKEREDQMYR--------------------- 139

  Fly   150 DPNKNSNENDEKMRSVLTKAVLWLFTIYMFVAFFSLLITPRSERPEGSTRYVSWNEFVHHMLAVG 214
                      |::|:        ||.|.:.::..:.|.|        |...:||.:||:.|||.|
  Rat   140 ----------ERLRT--------LFIIAIVMSLLNSLST--------SGGSISWADFVNEMLAKG 178

  Fly   215 EVKELIIRPDMEMVTIILHEGAVIKGRKVSSTIFHMAVADANKFEEKLRDVEKRLGI--KDGVPV 277
            ||:.:.:.|:.::|.:.||.|||:.||...:.::.|.||:.:|||||||..|..|.|  ||.:||
  Rat   179 EVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEEKLRAAEDELNIESKDRIPV 243

  Fly   278 TYDRQTDTTGRILMLLLVCALLMSIATRMKSIKSPLSMD----SFNQMGRAKFTLVDPFDGGRGV 338
            :|.| |...|..|..|.:.|:.::|...:..:......:    :|||:..|:||:||. ..|:||
  Rat   244 SYKR-TGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDG-KTGKGV 306

  Fly   339 LFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFL 403
            .|:||||:.|||.||:||||||||||::.:||||||:||||||||||||||||||||||||||||
  Rat   307 SFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFL 371

  Fly   404 SMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSGESEQTLN 468
            :|.|.||:|:||||||||||.||||.:.|||||:|||||||:|::||  .||...|:.|.|||||
  Rat   372 AMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRS--TSMSGFSNTEEEQTLN 434

  Fly   469 QLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLE 533
            |||||||||.|.:.|::||||||||:||.||:||||.|||:.||||||.||:||||:||..:||.
  Rat   435 QLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLT 499

  Fly   534 SPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVERLVGGTEKRSHALS 598
            .|.:.:|||||.||||||||||||:||||||||||.....|.:.|.||||||::.||.|:|..||
  Rat   500 QPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILS 564

  Fly   599 LAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQHLYSKEELFDKMCMA 663
            ..|::|:|:||||||||||:|.:::.::||:|.|||:.||||:|..|.:|:|::||:||::||||
  Rat   565 KEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLFERMCMA 629

  Fly   664 LGGRAAENLVFNRITTGAQNDLEKVTKIAYSQIKKFGMNDTLGPIYVRDADETEGGGAMGSGGKK 728
            |||||||.:.|:|:|:|||:||.|||:||||.:|:|||..::||:...:|.|    |.:|. |::
  Rat   630 LGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQE----GLVGI-GRR 689

  Fly   729 PFSRAMESMIDNEARHVVASAYQTTEGILTTHRDKLEKLAEALLEKETLDYDQVVQLIGPPPY 791
            |||:.::.|:|:|||.:||.||:.||.:|..:.|||:.||.||||||.::|:.:..||||||:
  Rat   690 PFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEALIGPPPH 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 341/615 (55%)
Spg7NP_001386039.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 105..134 7/28 (25%)
HflB 147..749 CDD:440233 317/607 (52%)
Interaction with PPIF. /evidence=ECO:0000250|UniProtKB:Q9UQ90 701..781 37/79 (47%)

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