DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and Psmc1

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_032973.1 Gene:Psmc1 / 19179 MGIID:106054 Length:440 Species:Mus musculus


Alignment Length:531 Identity:92/531 - (17%)
Similarity:155/531 - (29%) Gaps:247/531 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EAVWKDLRRRHESTEILE-------IGMTIQEIDYFLKNIDDW-----VKPTHVEKTFTTALDKP 97
            :|.:|:.::|.:..|..:       :.:..:|.|:    |..|     |.....:|.: ..||..
Mouse   205 QAFYKESKKRFDEDEEFKKRAYKCVVKLQSKEADF----IKAWNLICDVSRKEFQKVY-NCLDIS 264

  Fly    98 VIEK----------------DPKGVVLIISPWNYPVSMILLPMVPAIAAGNTVVIKPSELSENVA 146
            :.|:                :.||:|                   .:..|..:|..|.:      
Mouse   265 IKERGESYYQDMMTAVVKEFEEKGLV-------------------EVDEGRKIVFAPGQ------ 304

  Fly   147 ATFEKLIPKYFESKYVTVV--NGGIP-ETTD-------LLKERFDHILYTGCPPVAKIIMTAAAK 201
                 .||       :|:|  :||.. :|:|       |..|:.|.|:|        :..:..|.
Mouse   305 -----SIP-------LTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIY--------VTDSGQAM 349

  Fly   202 HLTPVTLELGGKCPVVVEDDADIDISAKRIAWGKWLNCGQTCLAPDYILVNSTVKPKLVAAIRKY 266
            |...                  |..:|:.|.|                     ..||:.......
Mouse   350 HFQV------------------IFAAAQLIGW---------------------YDPKVTRVEHAG 375

  Fly   267 VNEFYGEDVKASK----DYARMIN------QRHFDRISGL----------LDKTQGAVLIGGERD 311
            .....|||.|..|    |..|:::      :|..|::...          |:|.|.||..|..: 
Mouse   376 FGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEKERDKVLTPEELEKAQQAVAFGCIK- 439

  Fly   312 RADLYIPPTVLDVEKSDPFMHDEIFGPVLPIITVQSFSESLEYIADGEKPLAAYI---FTRNEAK 373
            .|||           |...::|.:|          ||.:.|    |.....|||:   |||..: 
Mouse   440 YADL-----------SHNRINDYVF----------SFDKML----DDRGNTAAYLLYAFTRIRS- 478

  Fly   374 VKRLLNETSSG---GVTVNDVLMHITVDTLPFGGVGVSGMGRYRGKYGFDTFTHEKSVLHRGFFG 435
            :.||.|...:.   .....||::                             .|||    ....|
Mouse   479 IARLANIQEAALRKAAETTDVIL-----------------------------DHEK----EWKLG 510

  Fly   436 ESLLAARYPPLSQQKLDQM----------------------------RRLTGKRISLNLMNV--- 469
            :.:|  |:|.:.|:..|.:                            .|.||:.:.:|:..:   
Mouse   511 KCIL--RFPEILQKITDDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLC 573

  Fly   470 -ATLPIVMASF 479
             ||..::...|
Mouse   574 EATAAVMAKGF 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 64/360 (18%)
Psmc1NP_032973.1 PTZ00361 1..440 CDD:185575 55/324 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104
Blue background indicates that the domain is not in the aligned region.

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