DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and Y47C4A.1

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001362034.1 Gene:Y47C4A.1 / 189973 WormBaseID:WBGene00021615 Length:388 Species:Caenorhabditis elegans


Alignment Length:463 Identity:208/463 - (44%)
Similarity:276/463 - (59%) Gaps:101/463 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 DSFNQMGRAKFTLVDP--FDGGR--GVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRG 376
            |..:.|.:.|||::||  .:|.:  .:.|:||||.||||.|::|||||||:|             
 Worm     3 DMMSNMTKGKFTIIDPHSVEGKKQLKIKFKDVAGCSEAKVEIREFVDYLKNP------------- 54

  Fly   377 ALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDE 441
                                                                             
 Worm    55 ----------------------------------------------------------------- 54

  Fly   442 IDAIGRQRSGTESMGQGSSGESEQTLNQLLVEMDGMATKEG-VLMLASTNRADILDKALLRPGRF 505
                ||...|.    .|.|||.||||||||||||.|.:..| |::||||||||:|||||||||||
 Worm    55 ----GRFTVGI----SGGSGEEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRF 111

  Fly   506 DRHILIDLPTLAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNT 570
            ||||.|||||:.|||::||.::..:||:..|..:|||||.|||.|:||||.|||||:|:.||.|.
 Worm   112 DRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNK 176

  Fly   571 QMEVSSKNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTS 635
            ...|:.|::|||::|::.|:||||.:|...||:|:||||:|||||||||.::|.||||||:|:||
 Worm   177 CHVVTIKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKVTIIPQTS 241

  Fly   636 LALGFAQYTP-SEQHLYSKEELFDKMCMALGGRAAENLVFNRITTGAQNDLEKVTKIAYSQIKKF 699
            .|||||||:| .::|||||:||||:|||.||||.||||.|.|||:|||:||:|:||.||:|:|.:
 Worm   242 AALGFAQYSPRDDKHLYSKDELFDRMCMMLGGRCAENLKFGRITSGAQDDLQKMTKSAYAQVKLY 306

  Fly   700 GMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGILTTHRDKL 764
            ||:..:||:...:.:..:         .||:.:...|..|.||..:||.|.:.|..::..:.|||
 Worm   307 GMSSIVGPLSFPNTERFQ---------IKPYLKKFASTFDQEATLIVAKANEATTDLIKNNMDKL 362

  Fly   765 EKLAEALL 772
            |.:...||
 Worm   363 ETVCARLL 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 208/463 (45%)
Y47C4A.1NP_001362034.1 HflB <24..370 CDD:440233 198/440 (45%)

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