DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spg7 and ppgn-1

DIOPT Version :9

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_500191.3 Gene:ppgn-1 / 177021 WormBaseID:WBGene00021425 Length:747 Species:Caenorhabditis elegans


Alignment Length:716 Identity:339/716 - (47%)
Similarity:488/716 - (68%) Gaps:29/716 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 PEKGSAKAKDDSSKEKKSAVAAEDGDKSSRAAGEEAASTPTSSSTIGEPGEDPNKNSNENDEKMR 163
            |::..|:.|::||:.:||.....:.:.|..:.|..  .|.:.:.:..|..|:...|..:||.: :
 Worm    41 PQRRPARPKEESSEAEKSPPKRWEFEISWSSKGHR--ETKSDAKSASEGNENGGGNKGDNDPR-K 102

  Fly   164 SVLTKAVLWLFTIYMFVAFFSLLITPRSERPEGSTRYVSWNEFVHHMLAVGEVKELIIRPDMEMV 228
            .::.|...|| .|.:|......:::|:......:.: :||:||::.:|..|:|..:||.|:.::.
 Worm   103 QLMEKMKRWL-AISLFAYGILFILSPKGAAAVTADK-ISWSEFINELLPTGQVYRIIILPEKDVA 165

  Fly   229 TIILHE-GAV-IKGRKVSSTIFHMAVADANKFEEKLRDVEKRLGI--KDGVPVTYDRQTDTTGRI 289
            .:..:: ||. .:|.|::| ::.:.:....:||.::|..|..||:  :....:.| |:::...:.
 Worm   166 YLYCYDTGAKNSRGEKLAS-MYRVGIPSVARFETEVRAAEAALGLPPEHWTQIEY-RRSENVAQW 228

  Fly   290 LMLLLVCALLMSIATRMKSIKSPLSM-DSFNQMGRAKFTLVDP--FDGGR--GVLFRDVAGLSEA 349
            ..::::..||:......:..|...:| |..:.|.:.|||::||  .:|.:  .:.|:||||.|||
 Worm   229 FTIIVLGGLLLGGFVLFRKFKGSFNMSDMMSNMTKGKFTIIDPHSVEGKKQLKIKFKDVAGCSEA 293

  Fly   350 KQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMI 414
            |.|::|||||||:|.::.:||||:||||||.|||||||||||||:|.|:.|||:|||||||:|:|
 Worm   294 KVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVEVI 358

  Fly   415 GGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMG---QGSSGESEQTLNQLLVEMDG 476
            |||||:|:|.||||.:.||||||||||||||||:||.....|   .|.|||.|||||||||||||
 Worm   359 GGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDG 423

  Fly   477 MATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLESPPTTFSQ 541
            |.:..||::||||||||:|||||||||||||||.|||||:.|||::||.::..:||:..|..:||
 Worm   424 MGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQ 488

  Fly   542 RLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVERLVGGTEKRSHALSLAERKVIA 606
            |||.|||||:||||.|||||:|:.||.|....|:.|::|||::|::.|:||||.:|...||:|:|
 Worm   489 RLAALTPGFTGADIMNVCNESAIRAASNKCHVVTHKDMEYALDRVLAGSEKRSRSLVEEEREVVA 553

  Fly   607 YHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQHLYSKEELFDKMCMALGGRAAEN 671
            |||:|||||||||.::|.||||||:||||.|||||||:|.::||:||:||||:|||.||||.|||
 Worm   554 YHEAGHALVGWMLEHTDALLKVTIIPRTSAALGFAQYSPRDKHLFSKDELFDRMCMMLGGRCAEN 618

  Fly   672 LVFNRITTGAQNDLEKVTKIAYSQIKKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMES 736
            |.|.|.|:|||:||:||||.||:|:|.:||:..:||:   ....|||...      ||:|:...|
 Worm   619 LKFGRATSGAQDDLQKVTKSAYAQVKLYGMSSIVGPL---SFPNTEGFQI------KPYSKKFAS 674

  Fly   737 MIDNEARHVVASAYQTTEGILTTHRDKLEKLAEALLEKETLDYDQVVQLIGPPPYDLGKRQVESV 801
            ..|.||..:||.|.:.|..::..:.||||.:|:|||::|.|:|:.|.:|||.|.:. .|..::.|
 Worm   675 TFDQEATLIVAKANEATTDLIKNNMDKLETIAQALLKREVLNYEDVKKLIGTPKFG-DKHVIDMV 738

  Fly   802 E 802
            |
 Worm   739 E 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 FtsH_ext 171..276 CDD:284011 26/108 (24%)
FtsH_fam 333..787 CDD:273520 278/458 (61%)
AAA 378..513 CDD:278434 103/137 (75%)
Peptidase_M41 595..785 CDD:279742 101/189 (53%)
ppgn-1NP_500191.3 FtsH_ext 111..212 CDD:377663 26/103 (25%)
FtsH_fam 277..725 CDD:273520 277/456 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162575
Domainoid 1 1.000 207 1.000 Domainoid score I1692
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H31133
Inparanoid 1 1.050 623 1.000 Inparanoid score I476
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48979
OrthoDB 1 1.010 - - D119497at33208
OrthoFinder 1 1.000 - - FOG0005483
OrthoInspector 1 1.000 - - oto18437
orthoMCL 1 0.900 - - OOG6_106460
Panther 1 1.100 - - LDO PTHR43655
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3185
SonicParanoid 1 1.000 - - X4433
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.840

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