DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spg7 and Afg3l1

DIOPT Version :9

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_473411.2 Gene:Afg3l1 / 114896 MGIID:1928277 Length:789 Species:Mus musculus


Alignment Length:793 Identity:327/793 - (41%)
Similarity:442/793 - (55%) Gaps:114/793 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VGLIARSLQLTPKEVRLMHLRSLSST--AKPPTASDGKTEKHEQPEKGSAKAKDDSS----KEKK 115
            :|..::.|.|..|      |.|.|..  :|||..    .||..:.:|....|...:|    ||.|
Mouse    49 LGRCSQQLALQGK------LTSFSPRLYSKPPRG----FEKFFKNKKNRKSASPGNSVPPKKEPK 103

  Fly   116 SAVAAEDGDKSSRAAGEEAASTPTSSSTIGEPGEDPNKNSNENDEKMRSVLTKAVLWLFTIYMFV 180
            :  |...||..:|  |.:....|.....  :.||.|     .:|:..||:   |||.......|:
Mouse   104 N--AGPGGDGGNR--GGKGDDFPWWKRM--QKGEFP-----WDDKDFRSL---AVLGAGVAAGFL 154

  Fly   181 AFFSLLITPRSERPEGSTRYVSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIKGRKVSS 245
            .|:.        |..|  :.::|..||.:.||.|.|..|.: .:.:.|.:|...|.      .|.
Mouse   155 YFYF--------RDPG--KEITWKHFVQYYLARGLVDRLEV-VNKQFVRVIPVPGT------TSE 202

  Fly   246 TIFHMAVADANKFEEKLRDVEKRLGIK--DGVPVTYDRQTDTTGRILMLLLVCALLMSI---ATR 305
            ......:...:.||..|...:..|||:  :...|.|..::|  |..|..|:...:|:||   |.|
Mouse   203 RFVWFNIGSVDTFERNLESAQWELGIEPTNQAAVVYTTESD--GSFLRSLVPTLVLVSILLYAMR 265

  Fly   306 MKSIKSPLSMDSFNQMGRAKFTLVDPFDGGRG-------------------VLFRDVAGLSEAKQ 351
                :.|        ||..:        ||||                   |.|.||||..|||.
Mouse   266 ----RGP--------MGTGR--------GGRGGGLFSVGETTAKILKNNIDVRFADVAGCEEAKL 310

  Fly   352 EVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGG 416
            |:.|||::||:|::||.||||:|:||:|.||||.||||||||.|.||.|||:::|||||:||..|
Mouse   311 EIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVG 375

  Fly   417 LGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSG---ESEQTLNQLLVEMDGMA 478
            :|.|||||:|...:|.||||::|||||||||:|      |:|..|   |.|.||||:||||||..
Mouse   376 VGPARVRDMFAMARKHAPCILFIDEIDAIGRKR------GRGHLGGQSEQENTLNQMLVEMDGFN 434

  Fly   479 TKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLES--PPTTFSQ 541
            :...|::||.|||.||||.||.|||||||.|.|..|.:..|..||:.||..:||:.  .....|:
Mouse   435 SSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSR 499

  Fly   542 RLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVERLVGGTEKRSHALSLAERKVIA 606
            :||.|||||:||||:||||||||.|||:....|..::.|.|:||::||.||::..|..:|:..:|
Mouse   500 KLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVA 564

  Fly   607 YHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQHLYSKEELFDKMCMALGGRAAEN 671
            |||:|||:|||.|.::|.||||:|:|| ...||:|||.|.||.||::|:|||:|||.||||.||.
Mouse   565 YHEAGHAVVGWFLEHADPLLKVSIIPR-GKGLGYAQYLPREQFLYTREQLFDRMCMMLGGRVAEQ 628

  Fly   672 LVFNRITTGAQNDLEKVTKIAYSQIKKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMES 736
            |.|.:||||||:||.|||:.||:||.:|||::.||.:   ..|....|..|   .:||:|.|...
Mouse   629 LFFGQITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQV---SFDFPRQGETM---VEKPYSEATAQ 687

  Fly   737 MIDNEARHVVASAYQTTEGILTTHRDKLEKLAEALLEKETLDYDQVVQLIGPPPYDLGKRQVESV 801
            :||.|.|.:|.|||..|..:||..|:::||:...|||||.|:...:::|:||.|: ..|...|  
Mouse   688 LIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELLGPRPF-AEKSTYE-- 749

  Fly   802 EFEQSLKNLSTDT 814
            ||.:...:|..||
Mouse   750 EFVEGTGSLEEDT 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 FtsH_ext 171..276 CDD:284011 23/106 (22%)
FtsH_fam 333..787 CDD:273520 248/477 (52%)
AAA 378..513 CDD:278434 85/137 (62%)
Peptidase_M41 595..785 CDD:279742 93/189 (49%)
Afg3l1NP_473411.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..121 11/43 (26%)
FtsH_ext 142..233 CDD:284011 25/110 (23%)
FtsH_fam 281..738 CDD:273520 244/469 (52%)
AAA 337..468 CDD:278434 84/136 (62%)
Peptidase_M41 554..736 CDD:279742 93/188 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 749..789 6/16 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217929at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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