DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spg7 and spg7

DIOPT Version :10

Sequence 1:NP_570017.1 Gene:Spg7 / 31253 FlyBaseID:FBgn0024992 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_002933705.2 Gene:spg7 / 100485977 XenbaseID:XB-GENE-6034036 Length:768 Species:Xenopus tropicalis


Alignment Length:805 Identity:376/805 - (46%)
Similarity:517/805 - (64%) Gaps:103/805 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GSQLIQLRSATGQPPRIG-----RELSLLQLSRRQVMQLQAEYKAIVGLIARSLQLTP-----KE 70
            |..|:.||..     |:|     |::...:.|..:::|         .|:.|:  |||     :|
 Frog     2 GILLLALRGL-----RLGSAGCWRKVPRAECSESRILQ---------NLLCRN--LTPGSHGMRE 50

  Fly    71 VRL-MHL--------RSLSSTAKPPTASDGKTEKHEQPEKGSAKAKDDSSKEKKSAVAAEDGDKS 126
            ..: .||        |.|.......|:..|..|...:..||....:|:..|:::     |..|:.
 Frog    51 YLIKRHLIQDPLRIWRILGGINYFSTSGRGNKENQNEGSKGKTPHEDEEEKKRR-----EREDQM 110

  Fly   127 SRAAGEEAASTPTSSSTIGEPGEDPNKNSNENDEKMRSVLTKAVLWLFTIYMFVAFFSLLITPRS 191
            .|                               |::|           |:::.....|||.:..|
 Frog   111 YR-------------------------------ERLR-----------TLFIIAVIMSLLNSLSS 133

  Fly   192 ERPEGSTRYVSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIKGRKVSSTIFHMAVADAN 256
                 |...:|||:||:.|||.|||..:.:.|:.::|.|.|:.|||:.||...:.::.|.||:.:
 Frog   134 -----SGGNISWNDFVNEMLAKGEVMRVQVVPESDIVEIYLYPGAVVFGRPRLALMYRMQVANID 193

  Fly   257 KFEEKLRDVEK--RLGIKDGVPVTYDRQTDTTGRILMLLLVCALLMSIATRMKSIKSPL----SM 315
            |||||||..|:  ::.:||.:||:|.| |...|..|..|.:.|:.::|...:..:....    :.
 Frog   194 KFEEKLRAAEEELKINVKDRIPVSYKR-TGFFGNALYALGMAAVGVAILWYIFRLAGMAGREGAF 257

  Fly   316 DSFNQMGRAKFTLVDPFDGGRGVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLL 380
            .:|||:..|:||:||. ..|:|:.|:||||:.|||.||||||||||||::|.:||||||:|||||
 Frog   258 SAFNQLKMARFTIVDG-KSGKGISFKDVAGMHEAKLEVKEFVDYLKSPDRYLQLGAKVPKGALLL 321

  Fly   381 GPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAI 445
            |||||||||||||||||||||||:|.||||:|:||||||||||.||||.:.|||||:|||||||:
 Frog   322 GPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARTRAPCIVYIDEIDAV 386

  Fly   446 GRQRSGTESMGQGSSGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHIL 510
            |::||  .:|...|:.|.||||||||||||||.|.:.|::|||||||||||.||:||||.||||.
 Frog   387 GKKRS--TNMSSFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIF 449

  Fly   511 IDLPTLAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVS 575
            ||||||.||:||||:||.|:||..|.:.:|||||.||||||||||||:||||||||||.....:.
 Frog   450 IDLPTLQERREIFEQHLKSLKLTQPGSFYSQRLAELTPGFSGADIANICNEAALHAAREGYQSID 514

  Fly   576 SKNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGF 640
            :.|.||||||::.||.|:|..:|..||:|:|:||||||||||:|.:::.::||:|.|||:.||||
 Frog   515 TFNFEYAVERVIAGTAKKSKIMSKEERRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGF 579

  Fly   641 AQYTPSEQHLYSKEELFDKMCMALGGRAAENLVFNRITTGAQNDLEKVTKIAYSQIKKFGMNDTL 705
            ||..|.||:||:||:|.::||||||||.:|.:.||::|||||:||.|||:|||:.:|::||..::
 Frog   580 AQILPREQYLYTKEQLLERMCMALGGRVSEAITFNKVTTGAQDDLRKVTRIAYAMVKQYGMVPSI 644

  Fly   706 GPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGILTTHRDKLEKLAEA 770
            |.:...|::.|.|      .|::|||:.::.|:|.||:.:|::||:.||.:|..:||||..|..|
 Frog   645 GQVSFPDSESTPG------IGRRPFSQGLQEMMDREAQLLVSTAYRRTEKLLLDNRDKLILLTNA 703

  Fly   771 LLEKETLDYDQVVQLIGPPPYDLGK 795
            |||:|.::||.:..||||||:...|
 Frog   704 LLEREVINYDDIEHLIGPPPFGAKK 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spg7NP_570017.1 HflB 178..788 CDD:440233 339/615 (55%)
spg7XP_002933705.2 HflB 118..721 CDD:440233 339/617 (55%)

Return to query results.
Submit another query.