Sequence 1: | NP_001259194.1 | Gene: | per / 31251 | FlyBaseID: | FBgn0003068 | Length: | 1218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005172682.1 | Gene: | per1a / 563926 | ZFINID: | ZDB-GENE-011220-1 | Length: | 1387 | Species: | Danio rerio |
Alignment Length: | 1352 | Identity: | 285/1352 - (21%) |
---|---|---|---|
Similarity: | 455/1352 - (33%) | Gaps: | 413/1352 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 GGESTESTHN----TKVSDSAYSNSCSNSQSQRSGS-SKSRLSGS----HSSGSSGYGGKPSTQA 58
Fly 59 SSSDMI-----IKRNKDKSRKKKKNKGAGQGAGQAQTLISASTSLEGRDEEKPRPSGTGCVEQQI 118
Fly 119 CRELQDQQHGEDHSEPQAIEQLQQEEEEDQSGSESEADRVEGVAKSEAAQSFPIPSPLSVTIVPP 183
Fly 184 SMGGCGGVGHAAGLDSGLAKFDKTWEAGPGKLESMTGVGAAAAGTGQRGERVKEDSFCCVISMHD 248
Fly 249 GIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQITTG--IPIAESRGSVPK----DA 307
Fly 308 KSTFCVMLRRYRGLKSGGFGVIGRPVSYEPFRL---GLTFREAPEEARPDNYMVSNGTNMLLVIC 369
Fly 370 ATPIKSSYKVPDEILSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLS 434
Fly 435 VMKETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGP 499
Fly 500 KQCNVFEAAPTCKLK-ISEEAQSRNTRIKEDIVKRLAETVSRPSDTVKQEVSRRCQALASFMETL 563
Fly 564 MDEVSRADLKLELPHENELTVSERDSVMLGEISPHHDYYDSKS---------------------- 606
Fly 607 ---------STETPP--------SYNQLNYNENLLRFFNSKPVTAPAELDPPKTEPPEPRGTCVS 654
Fly 655 GASGPMSPVHEGSGGSGSSGNFTTASN---------------IHM---SSVTNTSIAGTGGTGTG 701
Fly 702 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNGTN-SGTGTGTAS---------SSKGGS 756
Fly 757 AAIPPVTLTESLLNKHNDEMEKFMLKKHRESRGRTGEKSKKSANDTLKMLEYSG-PGHGIKRGGS 820
Fly 821 HSWEGEANKPKQQLTLGTDAIKGAAGSAGGAVGTGGVGSGGAGVAGGGG-------SGTGVAGTP 878
Fly 879 EGRATTTSGTGTPGGAGGGGGAGAAAAAGASSSVGSSTPGPS----SYPTCTQNINLWPPFSVGI 939
Fly 940 TPPVHSTHTAMAQSSF--SSAGLFPTFYYIPASLTPTSPTRSPRMHKHPHKGGTDMPTTSQQAAA 1002
Fly 1003 AAAQAMPLQYMAGVM------YPHPSL----FYTHPAAAAATAMMYQPMPFPGMANALQIPE--- 1054
Fly 1055 -----RPLGSQSAYNKSVYTTTPASMTKKVPGAFHSVTTPAQVQR-PSSQSASVKTEPGSSAAVS 1113
Fly 1114 DPCKKEVPDSSPIPSVMGDYNSDPPCSSSNPANNKKYTDSNGNSDDMDGSSFSSFYSSFIKTTDG 1178
Fly 1179 SESPPD----TEKDPK-------------HRKLKSMSTSESKIMEHPEEDQT 1213 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
per | NP_001259194.1 | PAS | 238..333 | CDD:279347 | 24/100 (24%) |
PAS | 238..>300 | CDD:238075 | 14/63 (22%) | ||
PAS | 388..495 | CDD:238075 | 41/106 (39%) | ||
PAS_11 | 391..495 | CDD:291273 | 41/103 (40%) | ||
per1a | XP_005172682.1 | PAS | 369..470 | CDD:238075 | 41/103 (40%) |
PAS_3 | 382..466 | CDD:285623 | 35/86 (41%) | ||
Period_C | 1161..1348 | CDD:288930 | 285/1352 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170592323 | |
Domainoid | 1 | 1.000 | 83 | 1.000 | Domainoid score | I8273 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 155 | 1.000 | Inparanoid score | I4269 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm25753 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11269 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X975 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.080 |