Sequence 1: | NP_001259194.1 | Gene: | per / 31251 | FlyBaseID: | FBgn0003068 | Length: | 1218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001309559.1 | Gene: | lin-42 / 173503 | WormBaseID: | WBGene00018572 | Length: | 654 | Species: | Caenorhabditis elegans |
Alignment Length: | 456 | Identity: | 91/456 - (19%) |
---|---|---|---|
Similarity: | 153/456 - (33%) | Gaps: | 182/456 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 391 FAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFC 455
Fly 456 SKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPKQCNVFEAAPTCKLKISEEAQ 520
Fly 521 SRNTRIKEDIVKRLAETVSRPSDTVKQEVSRRCQALASFMETLMDEVSRADLKLELP-------H 578
Fly 579 ENELTVSERD-----SVMLGEISPHHDYYDS---------------------------------- 604
Fly 605 ------------KSSTETPPSYNQLNYNENLLRFF--NSKPVTAPAELD--------PPKT---- 643
Fly 644 -------------------------------EPPEPRGTCVSGASG------PMSPVHEGSGGSG 671
Fly 672 SSGNFTTASNIHMSSVTNTS---------IAGT----------------GGTGTGTGTGTGTGTG 711
Fly 712 T 712 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
per | NP_001259194.1 | PAS | 238..333 | CDD:279347 | |
PAS | 238..>300 | CDD:238075 | |||
PAS | 388..495 | CDD:238075 | 35/103 (34%) | ||
PAS_11 | 391..495 | CDD:291273 | 35/103 (34%) | ||
lin-42 | NP_001309559.1 | PAS | 225..328 | CDD:238075 | 35/103 (34%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160157564 | |
Domainoid | 1 | 1.000 | 80 | 1.000 | Domainoid score | I5574 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D133095at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | oto17804 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3625 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.970 |