DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Atoh8

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_722473.1 Gene:Atoh8 / 71093 MGIID:1918343 Length:322 Species:Mus musculus


Alignment Length:241 Identity:66/241 - (27%)
Similarity:90/241 - (37%) Gaps:55/241 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RDTAAGRHPPALLRHATPHLQPKTESISDGDGDAELSDFSLNDTEEDEEDLRDYIVLNGNQADAN 110
            |..|.|...|.|   .||...|.::|::.||.:|.  .|.       |:.||..|:|....|...
Mouse   112 RGFALGTVGPGL---PTPPPPPASQSLAPGDPEAH--SFR-------EQALRPRILLCAPPARPT 164

  Fly   111 RSLSSSP-----RSHSRNGLLTAPA-SSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGV---- 165
            :|...:|     .|..|....|.|. ||.||:..........|..:.....|....|:..:    
Mouse   165 QSAPLAPPAAPQESPVRPAPPTRPGESSYSSISHVIYNNHPDSSASPRKRPGEATAASTEIKALQ 229

  Fly   166 --RKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQA 228
              |::..|.|||.|...:|.||..|||.||.:...:||||..|||.|..||..|.          
Mouse   230 QTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLA---------- 284

  Fly   229 PSHPIRAQMEPNNNDNRMAN-GHAADGENLENPDVPPVRHIKCERT 273
                            |:|: .::||..||...:...    :|.||
Mouse   285 ----------------RLADLDYSADHSNLSFSECVQ----RCTRT 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 25/58 (43%)
Atoh8NP_722473.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..96
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..144 12/36 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..221 13/61 (21%)
bHLH_TS_ATOH8 225..292 CDD:381427 27/92 (29%)
Basic motif, degenerate. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 231..244 5/12 (42%)
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 245..283 18/37 (49%)
Blue background indicates that the domain is not in the aligned region.

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