powered by:
Protein Alignment HLH3B and Msgn1
DIOPT Version :9
Sequence 1: | NP_525055.1 |
Gene: | HLH3B / 31249 |
FlyBaseID: | FBgn0011276 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001103021.1 |
Gene: | Msgn1 / 689864 |
RGDID: | 1587516 |
Length: | 187 |
Species: | Rattus norvegicus |
Alignment Length: | 145 |
Identity: | 39/145 - (26%) |
Similarity: | 63/145 - (43%) |
Gaps: | 21/145 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 106 QADANRSLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGG------NASSGGGSGVGATGG 164
||...:|||..|...|.:.:......||:|.|||.|...:.:|| :..:...|.:.|.||
Rat 40 QASPTQSLSPVPSLESYSEVALPCGHSGASTGGSDGYSSHEAGGLVELDYSMLAFQPSYIHAAGG 104
Fly 165 V-------------RKVFTNTRERWRQQNVSGAFAELRKLVPT--HPPDKKLSKNEILRSAIKYI 214
: |:...:.||:.|.:.::.|...||..:|. ....:.|:|.:.|:..||||
Rat 105 LKGQKGSKVKMSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYI 169
Fly 215 KLLTGILEWQQRQAP 229
:.||.:|...:...|
Rat 170 RELTDLLNGGREPRP 184
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH3B | NP_525055.1 |
HLH |
171..222 |
CDD:197674 |
16/52 (31%) |
Msgn1 | NP_001103021.1 |
HLH |
119..173 |
CDD:278439 |
15/53 (28%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
Return to query results.
Submit another query.