DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Tal2

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001102932.1 Gene:Tal2 / 685229 RGDID:1596467 Length:108 Species:Rattus norvegicus


Alignment Length:104 Identity:51/104 - (49%)
Similarity:60/104 - (57%) Gaps:23/104 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 RKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPS 230
            ||:|||||||||||:|:.|||:||||:|||||||||||||.||.|::||..|..:|..|..|   
  Rat     3 RKIFTNTRERWRQQSVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQSLQ--- 64

  Fly   231 HPIRAQMEPNNNDNRMANGHAADGENL----ENPDVPPV 265
                            ..|.||.|..|    ..|.:|.|
  Rat    65 ----------------QTGIAAQGNILGLFPHKPHLPDV 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 41/58 (71%)
Tal2NP_001102932.1 bHLH_TS_TAL2 2..62 CDD:381550 41/58 (71%)

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