DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Tal2

DIOPT Version :9

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001102932.1 Gene:Tal2 / 685229 RGDID:1596467 Length:108 Species:Rattus norvegicus


Alignment Length:104 Identity:51/104 - (49%)
Similarity:60/104 - (57%) Gaps:23/104 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 RKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPS 230
            ||:|||||||||||:|:.|||:||||:|||||||||||||.||.|::||..|..:|..|..|   
  Rat     3 RKIFTNTRERWRQQSVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQSLQ--- 64

  Fly   231 HPIRAQMEPNNNDNRMANGHAADGENL----ENPDVPPV 265
                            ..|.||.|..|    ..|.:|.|
  Rat    65 ----------------QTGIAAQGNILGLFPHKPHLPDV 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 HLH 171..222 CDD:197674 36/50 (72%)
Tal2NP_001102932.1 HLH 8..60 CDD:197674 37/51 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I7280
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45801
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13864
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.870

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