DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and LOC5666740

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_001688970.2 Gene:LOC5666740 / 5666740 VectorBaseID:AGAMI1_010089 Length:387 Species:Anopheles gambiae


Alignment Length:148 Identity:46/148 - (31%)
Similarity:58/148 - (39%) Gaps:32/148 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 ASSGSSVGGSGGGGGNG-SGGNASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVP 193
            |:....:.|:|.....| .|...||...:.|.|   |.:  .|.|||.|.|.|:..||.||:.:|
Mosquito    52 ATLAKQLAGAGPPAALGLPGRKRSSEPRTAVSA---VER--RNARERNRVQQVNNGFAALRQRIP 111

  Fly   194 THPPD------------KKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHPIRAQMEPNNNDNRM 246
            ....|            |||||.|.||.|::|||.|..:||.....|...|  |...|       
Mosquito   112 DEIADAFEAGTTARGVHKKLSKVETLRMAVEYIKSLERLLEQSGTAAGRLP--AAFPP------- 167

  Fly   247 ANGHAADGENLENPDVPP 264
                 .|....:.|..||
Mosquito   168 -----VDTPETQLPATPP 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 28/70 (40%)
LOC5666740XP_001688970.2 None

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